Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03273 ATGGGAAAAGACTCGAAGCCAAAGGAGTCAGGAGGGAAGGGCAAGGGGAAGCAGGCAGCAAGTGGAAGTGATGAGAATGCCTCCAAGGGAAAAGGAAAAGGTGCGAAAGGTGGAGATGGGCTTGGTACTTGCACCTATGTCAAAGCAAGGCATATCTTATGTGAGAAACAAGGTAAGATCAATGAAGCCTACAAGAAGCTGCAGGATGGATGGCTTAGCAATGGAGATAAGGTCCCCCCAGCAGAGTTTGCAAAGTTAGCCCAAGAGTATTCTGAGTGTCCATCAGGAAAGAAGGGTGGAGACCTTGGATGGTTTCCCAGAGGAAAGATGGCTGGGCCATTTCAGGATGTTGCCTTCAGCACGACTATCGGGGCTACTAGTGCTCCTTTCAAATCAACGCATGGCTACCATATTATCTTATGTGAAGGAAGAAAGAACTGA 441 0.4807 MGKDSKPKESGGKGKGKQAASGSDENASKGKGKGAKGGDGLGTCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKLAQEYSECPSGKKGGDLGWFPRGKMAGPFQDVAFSTTIGATSAPFKSTHGYHIILCEGRKN. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03273 146 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 44 143 IPR000297 GO:0003755
Seca4g03273 146 SUPERFAMILY FKBP-like 43 142 - -
Seca4g03273 146 PANTHER - 1 146 IPR043323 GO:0003677|GO:0003755|GO:0006364
Seca4g03273 146 Pfam PPIC-type PPIASE domain 47 140 - -
Seca4g03273 146 ProSitePatterns PpiC-type peptidyl-prolyl cis-trans isomerase signature. 83 103 IPR023058 -
Seca4g03273 146 Gene3D - 45 144 IPR046357 GO:0003755
Seca4g03273 146 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03273 Seca-Chr4 56458288 56460995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03273 47 139 Sulfurtransferasese or Rhodanese AT5G19370 31.183 1.89e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03273 K09579 - zju:107419189 258.455