Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03263 ATGGCCACCGTCACCACACAGGCTTCCGCCGCCGTTTTCCGGCCATGTGCTTCCAAATCAAGGTTCCTCACCGGCTCTTCCGGTAAACTGAACAGGGAAGTGGCTTTTAGGCCAATAGGGTGCCCTCCTTCTGCCTCTTTCAAGGTTGAAGCCAAGAAAGGAGAGTGGTTACAAGGCTTGGCCTCCCCTACTCACCTCAATGGCAGTCTTCCTGGTGACAATGGGTTTGATCCTTTGGGGCTTGCTGAGGACCCAGAGAACTTGAAGTGGTTTGTTCAAGCAGAGCTTGTCAATGGACGTTGGGCCATGTTGGGTGTTGCAGGGATGTTGCTTCCTGAGGTCTTCACCAAAATTGGAATCATCAATGTCCCTAAATGGTATGATGCTGGGAAAGAAGAGTTCTTTGCTTCCTCCTCTACCCTATTTGTGATTGAGTTCATTCTGTTCCATTACGTGGAGATAAGAAGATGGCAGGACATTAAGAACCCCGATAGTGTCAACCAAGATCCAATCTTCAAGCAATACAGTTTTCCCCCAAATGAGGTTGGATACCCTGGTGGCATTTTTAACCCCTTGAACTTTGCACCAACTCTGGAGGCCAAAAAGAAGGAAATTGCCAATGGGAGATTGGCAATGTTGGCATTCTTGGGATTTATAGTTCAACACAATGTGACAGGCAAAGGACCATTTGATAACCTCTTGCAGCACCTCTCTGATCCATGGCACAACAACATCGTCCAAACACTAGGTGGCAACTAA 759 0.4783 MATVTTQASAAVFRPCASKSRFLTGSSGKLNREVAFRPIGCPPSASFKVEAKKGEWLQGLASPTHLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPKWYDAGKEEFFASSSTLFVIEFILFHYVEIRRWQDIKNPDSVNQDPIFKQYSFPPNEVGYPGGIFNPLNFAPTLEAKKKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNNIVQTLGGN. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03263 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Seca4g03263 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 31 248 IPR001344 GO:0009765|GO:0016020
Seca4g03263 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Seca4g03263 252 FunFam Chlorophyll a-b binding protein, chloroplastic 63 242 - -
Seca4g03263 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03263 Seca-Chr4 56250026 56251956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03263 43 245 Chloroplast and Mitochondria Gene Families AT3G61470 52.830 9.80e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03263 K08910 - rcu:8263414 474.937