Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03246 ATGGTGAATATGTGGGCCATAACGCATGATGAGAAGGTGTGGGCAGAGCCAGAGGAGTTCAAGCCTAAGTGGTTCATGAAAGAGGATGTGAACATAATGAGATTTGATTTGAGGTTGGCTCCATTTGGGTGTGGAAGAAGGGTCTGTCCTGGGAAGACCATGGGCTTAGCCTCTATTCACCTCTGGCTTGCACAATGGCTTCAAAGCTTCAAATGGGTTCCCTCTGAGGATGCCCCTGTTGACTTGTCTGAGTGCCTTAAGCTGTCTATGGAGATGAAAAGCCCACACCTTTTGACTTGTGAAAAATCGATTATATATTACCCATAG 327 0.4618 MVNMWAITHDEKVWAEPEEFKPKWFMKEDVNIMRFDLRLAPFGCGRRVCPGKTMGLASIHLWLAQWLQSFKWVPSEDAPVDLSECLKLSMEMKSPHLLTCEKSIIYYP. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03246 108 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 42 51 IPR017972 GO:0005506|GO:0016705
Seca4g03246 108 PRINTS E-class P450 group I signature 39 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03246 108 PRINTS E-class P450 group I signature 49 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03246 108 PRINTS E-class P450 group I signature 3 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03246 108 SUPERFAMILY Cytochrome P450 1 100 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03246 108 PANTHER CYTOCHROME P450 78A7-RELATED 1 100 - -
Seca4g03246 108 Pfam Cytochrome P450 1 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g03246 108 Gene3D Cytochrome P450 1 105 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03246 Seca-Chr4 55894523 55894849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03246 1 95 Cytochrome P450 AT1G13710 63.158 4.96e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03246 K20619 - nnu:104597909 159.844