Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03244 ATGGCAGAGCAAAGCAAGGTGATCCTACATGGGATGTGGGCTAGCCCTTATGCCAAGAGGGTGGAATTGGCCCTTGAACTCAAGGGCATACCTTACGAGTATGTGGAAGAAGATTTAGCAAACAAAAGTGATTTACTTGTCAAGTACAACCCTGTTTACAAGAAGGTTCCTGTACTTGTTCATAATGGAAAGGCCATAGCTGAGTCACTTGTTATCCTTGAGTATATTGACGAAACCTGGAAAGATGGTCCTAAACTGCTTCCTGATGATCCCTACAAGAGATCCCAAGTGCGCTTCTGGTCTAATTTCATCCAGGATCAGCTATTTGAGACCACATTTCTAGTACTCACAACTGAAGGAGAAGCGCAACAAAAATCTGTTGACAAAGTGTATGAGAAACTGAATCTGCTTGAAGATGGAATGAAGACATTTTTTGTGGATGGTAATCCTGGTGTTAACGAAAACAATGCTGGAATCCTAGACATTGTGTTTTGTTCGTTATTTGGCGCTTACAAGGCTCAGGAAGAGGTTATTGGTTTGAAGCTGATAGTGGCAGAGAAGTTTCCTGTGTTATATTCTTGGCTGATGACTCTTGTTGAGCTCCAAGCGGTGAAAAAGGCAGCTCCTCCACATGATAAAGCAGTGGAAGTTCTTCAGCGTTTTCGGCAGAATGCACTAAAATCTTCTACCGCTGCTTGA 699 0.4278 MAEQSKVILHGMWASPYAKRVELALELKGIPYEYVEEDLANKSDLLVKYNPVYKKVPVLVHNGKAIAESLVILEYIDETWKDGPKLLPDDPYKRSQVRFWSNFIQDQLFETTFLVLTTEGEAQQKSVDKVYEKLNLLEDGMKTFFVDGNPGVNENNAGILDIVFCSLFGAYKAQEEVIGLKLIVAEKFPVLYSWLMTLVELQAVKKAAPPHDKAVEVLQRFRQNALKSSTAA. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03244 232 Gene3D - 87 229 - -
Seca4g03244 232 FunFam Glutathione S-transferase U10 1 85 - -
Seca4g03244 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 216 IPR045073 -
Seca4g03244 232 Gene3D Glutaredoxin 1 86 - -
Seca4g03244 232 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Seca4g03244 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Seca4g03244 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Seca4g03244 232 FunFam Glutathione S-transferase U9 87 228 - -
Seca4g03244 232 SFLD Main.3: Omega- and Tau-like 4 229 IPR045073 -
Seca4g03244 232 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Seca4g03244 232 SFLD Glutathione Transferase (cytosolic) 4 229 IPR040079 -
Seca4g03244 232 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Seca4g03244 232 CDD GST_N_Tau 7 80 - -
Seca4g03244 232 SUPERFAMILY GST C-terminal domain-like 78 223 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03244 Seca-Chr4 55768857 55770636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03244 3 232 Glutathione S-transferase Gene Family AT1G74590 49.130 2.32e-82 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03244 K00799 - gmx:547581 346.665