Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03214 ATGGAGATGGATGATAATGATGTTTATTTTTCTACACCATCAAAAAGCTCAAATGATCCACTAGAGACATCAGAGGAATGGGTTCCTGAGTGTGATGAAGAAATCAAACCCGTAGTTGGCAAGATATTTGATACTTTAGATCAAGGAGGGGGCTTCTATAAAAGGTATGCACTTCTTGCTAGTTTTAGTGTACGCAAAGCAACTGAAATAAAATGGAAATATTTCCTTTGTTCAAAAGAAGGCTTCAAATTAGAGAAAAAAGGGGTCATACCTGAATTGCTTATTGATGAAAAAAAATTGCCAAAAACTAGACGGAGAAAATTAACAAGGGAAGGGTGTAATGCAAAGATTATTTTTAAGAGGACAACAGAAGGTAAATATGAAATTGTTAGATTTCATGAAGGTCATACACATACATTAGCCACACCTAGAAAGAAGCAATTCTTAAGATCTGCAAGAAGCATAAACAATGTCCATAAGAATTTGCTAATTTCCTATAATAAAGCCAATGTAGGGCCCTCTAAAGTTTATCAATTATTAAAAGAGCAAGTTGGGAGTTATGACAATATAGGATGCACAATGAGAGGTCTCCAAAATTATTCTAGGGACTTGAAAGACTTAATCAAAGACTTTAATGCACATATGTTTGTTGACAATTTTAAGAGAAAACATGAGATGAACCACTCATTTTACTATGACTATGAGGTTGATGATGAAGGAAGGCTGAAATATGTGTTTTGGGCTGATGATCAGGACCCCGCTATGAAGATTGCAATAGAGAATGTTTTCACAGGTTCTTCTCATAGATTTTGCATGTGGCACATACTAAAAAAACTTTCAGAAAAGGTTGGTGTTTCCTTGAATTCCAATGTTGATTTCAATAGTCGTTTCAAGTCTTGTATTTGGAATTTAGAGTCTCCAGAAGACTTTGAACTTGTGTGGAACACTATTATTAGTGATTTTAAGTTAGAAGAAAATGGTTGGCTTTCACAAATGTATGACATGCGAAGTATGTGGATACCTGCTTATTTTAAAGGTGTTTTTTTGGCTGGAATTTTGAGAACAACCTCAAGATCCGAGAGTGAAAATTCATTCTTTGGTAATTACTTGAATAAGATCCTTAGTTTGGTGGAATTTTGGTTGAGATTTGATTCTGCGATAGAAGCACAAAGGCATAAGGAGCTACTTGCAGATAATGATACATTTAATACTATGCCTGAATTGAAGTTACATAAGGATATAGAGAAACATGGCAGAGAAATTTACACTCATGAAAATTTCTACATATTTCAAGGTGAGTTGTGGCGTGCATGTGTGGATTGTGGGGTTGAAGGATCTAGAGAGGACAATGGGCAGTCATTAATTTCTATAATTGAGCATATTATGGTTAATGGCAACAAAGTTAGCAAACTCAAGGAAGTTGTTTATAATCCTTCCAATCACATTGCACATTATGGATTGGCGACTAGTACTCCAATTTTTTATTATGATGGCAATGTATTGGAGGCATGTTCTAAATTGGAAGGTGAGACCAAGTTAATTTCTGATGCATCGCCACAATTGTTTAAATGCATGCATATGGCTGGTACTTGTAAAGAGAAACTACTCCTTGTCATAAATGAAGCTTCTAGCATTGAATTGAAATTAACAAGGATGAAAGGTGATGTTGGACCAAGTAAGTTAGATGAATTAGAGTCCTTTGTTGGTTCCAATGTACCAAAGGATGTTGATATTCTTCCCCCTCAACCTTCAAATACTAAAGGATGTGGCAAAAGGATCAAAGGACCTCTTCCTAATTTTTGGCTAAAGTATGTTCCAAATGCAAGCTTGTCACTTTCTTATAATGATGTAAGGGGCAACTGGGGTCTAGGGACGGGCGACGGTGACTCGTTAATGAAGGATATTGTGCCTGAGGGCAAGGAGCTAAATGCCAGTGCCAAGGGAAGCACGCAAGAAGCTAGTGGCATAGCTGGGCACATTCTCCAACCCGAACCAAAGCTCCAAAAACCTTTCTGGCCAGAACAACAAGGGAGCATCCCACACTTTGGGATCCCTCCCAATTGCCCAAACATTCACTAA 2079 0.3704 MEMDDNDVYFSTPSKSSNDPLETSEEWVPECDEEIKPVVGKIFDTLDQGGGFYKRYALLASFSVRKATEIKWKYFLCSKEGFKLEKKGVIPELLIDEKKLPKTRRRKLTREGCNAKIIFKRTTEGKYEIVRFHEGHTHTLATPRKKQFLRSARSINNVHKNLLISYNKANVGPSKVYQLLKEQVGSYDNIGCTMRGLQNYSRDLKDLIKDFNAHMFVDNFKRKHEMNHSFYYDYEVDDEGRLKYVFWADDQDPAMKIAIENVFTGSSHRFCMWHILKKLSEKVGVSLNSNVDFNSRFKSCIWNLESPEDFELVWNTIISDFKLEENGWLSQMYDMRSMWIPAYFKGVFLAGILRTTSRSESENSFFGNYLNKILSLVEFWLRFDSAIEAQRHKELLADNDTFNTMPELKLHKDIEKHGREIYTHENFYIFQGELWRACVDCGVEGSREDNGQSLISIIEHIMVNGNKVSKLKEVVYNPSNHIAHYGLATSTPIFYYDGNVLEACSKLEGETKLISDASPQLFKCMHMAGTCKEKLLLVINEASSIELKLTRMKGDVGPSKLDELESFVGSNVPKDVDILPPQPSNTKGCGKRIKGPLPNFWLKYVPNASLSLSYNDVRGNWGLGTGDGDSLMKDIVPEGKELNASAKGSTQEASGIAGHILQPEPKLQKPFWPEQQGSIPHFGIPPNCPNIH. 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03214 692 MobiDBLite consensus disorder prediction 9 23 - -
Seca4g03214 692 MobiDBLite consensus disorder prediction 1 23 - -
Seca4g03214 692 Pfam FAR1 DNA-binding domain 52 141 IPR004330 -
Seca4g03214 692 MobiDBLite consensus disorder prediction 669 692 - -
Seca4g03214 692 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 449 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03214 Seca-Chr4 55189858 55193492 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g03214 FAR1 6.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03214 - - mtr:120577464 619.387