Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03183 ATGGAGTGGCTCTTCAATCGTTGGACGGGCGTGGCCGCAGCCATATGGATCCAGTGGAGCTGCGGTGCATCATACACCTTCAGCATCTACTCCCCCGTCCTCAAGTCCACCCAGGGCTACGACCAATCCACCCTCGACACCGTCTCCGTCTTCAAGGACATTGGCGCCAACTTCGGCGTCCTCTCCGGCCTCCTCTACTCCGCCGTTACCCCCTACTCCGACCACCAACGCCGCCGTCCCAAGTCCATATGGTCCTCCCTCGCCGGCCCCTGGGTTGTCGTCGCCGCCGGAGCCCTCCAATGCTTCGCCGGCTTCATCTTCATTTGGGCCTCCGTCGTCGGCTTAATCAACCCACCTCCCGTTCCCGTCATGTGCTTCTTTGCCTGGCTCGCCTCTAATGGCCAAACCTTCTTGAACACCACCAACGTCGTCACCGGCTTGCGCAATTTCCCTGCATATAGCGGCACCATCATCGGCATCATGAAGGGATTTCTTGGGCTCAGTGGAGCTATCTTGATCCAATTGTATCACACGTTTTGCGATGGTGACCCTACAACCTATCTTCTGATGCTTGCTTGTCTTCCTGCTTTTATCTGTGTCTTGCTTATGTTTCTTTTGAGGATCTACGAAGCGCACGAGGGTGATTACAAGAAGCATTTGGATGGTTTCTCTGTGGTCACGGTGATTATTGTTGCCTATCTCATGTTCATAATCATTTTACAGAATTTCGTGAGCTTACCCTATTGGGGACGGATTTTGGCGTTTGTGATTCTTGTGGTTCTCCTAGCATCGCCTTTTGGGATTGCTGCCAAAGCCCACTGCGAGGAGTCAAGGAAATTTGCACAAACCCCTTCAATGGAATACAGAGAGCTTCCTGGTGACGAGGGGGAGGTGCAGGTTACTTCGGATGATGAGGGGTTGCCGTGTGAAGTAGAAAAGAACCTCTTGCAAGCTATGTGTACGGTTGAATTTTGGATGTTGTTTGTTACCATGATATCTGGGTTGGGTTCTGGGTTGGCTACGATAAATAATATGAGCCAAATAGGGCAATCTCTTGGGTATAGTACTATTGAGATTAATAATTTGGTGTCATTGTGGAGTATGTGGAATTTCCTTGGCCGTTTTGGAGGTGGACATTTATCAGATTATATAATGCACAAAAAAGGTTGGCCGAGGCCCCTGTTGATGACTCTAACTCTGGGGATAATGATTCTTGGTCATGTAATTATAGCTTCTGGTTTCAGTGGAAATTTGTATTTGGGTCCTGTCCTGGTGGGCGTCTGCTATGGTGCGCATTGGTCCTTGATGCCTACAATCACTTCTGAGATATTTGGTGTGAAGCATATGGGTACCATTTTCAACACTATTGCTGCAGCTAGTCCACTTGGGTCTTATATACTTTCTGTGAGAGTTGTTGGATATATTTATGATAAGGAAGCCATTGAAGACGATAACTCATGCTTTGGCATCCACTGTTTCATGTTGTCGTTTCTGATCTTGGCTGGTGTGGCTTTTCTTGCATTTTTGGTTGGTCTGGCATTGTACTTCCGGACCCAAAAGTTCTATAAGCTAGTTGTGCTTAGAAGATTAAAGCATTATGCACGGTGA 1608 0.4826 MEWLFNRWTGVAAAIWIQWSCGASYTFSIYSPVLKSTQGYDQSTLDTVSVFKDIGANFGVLSGLLYSAVTPYSDHQRRRPKSIWSSLAGPWVVVAAGALQCFAGFIFIWASVVGLINPPPVPVMCFFAWLASNGQTFLNTTNVVTGLRNFPAYSGTIIGIMKGFLGLSGAILIQLYHTFCDGDPTTYLLMLACLPAFICVLLMFLLRIYEAHEGDYKKHLDGFSVVTVIIVAYLMFIIILQNFVSLPYWGRILAFVILVVLLASPFGIAAKAHCEESRKFAQTPSMEYRELPGDEGEVQVTSDDEGLPCEVEKNLLQAMCTVEFWMLFVTMISGLGSGLATINNMSQIGQSLGYSTIEINNLVSLWSMWNFLGRFGGGHLSDYIMHKKGWPRPLLMTLTLGIMILGHVIIASGFSGNLYLGPVLVGVCYGAHWSLMPTITSEIFGVKHMGTIFNTIAAASPLGSYILSVRVVGYIYDKEAIEDDNSCFGIHCFMLSFLILAGVAFLAFLVGLALYFRTQKFYKLVVLRRLKHYAR. 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03183 535 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 523 - -
Seca4g03183 535 Pfam Nodulin-like 87 268 IPR010658 -
Seca4g03183 535 Pfam Nodulin-like 7 69 IPR010658 -
Seca4g03183 535 SUPERFAMILY MFS general substrate transporter 231 520 IPR036259 -
Seca4g03183 535 ProSiteProfiles Major facilitator superfamily (MFS) profile. 322 535 IPR020846 GO:0022857
Seca4g03183 535 CDD MFS_Mch1p_like 7 507 - -
Seca4g03183 535 Pfam Major Facilitator Superfamily 327 520 IPR011701 GO:0022857|GO:0055085
Seca4g03183 535 SUPERFAMILY MFS general substrate transporter 4 208 IPR036259 -
Seca4g03183 535 Gene3D MFS general substrate transporter like domains 323 530 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03183 Seca-Chr4 54481011 54482705 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03183 1 532 Nodulin-like Gene Family AT1G74780 57.778 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03183 - - gmx:100775628 914.835