Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03182 ATGGAGCATGTGAACTTGAATTTCTACCTTAACTCGAAGTGGGTATCAACGGTGGCGAGTATATGGATTCAGTGCACCAGTGGGTCTCTCTACACTTTCTCCATCTACTCCCAAACTCTAAAATCAACTCAGCACTACGATCAGTCAACGCTCGACATCGTCTCTGTCTTCAAGGACATCGGAGCCAACGTTGGCGTCATCTCTGGCCTCCTATACGACTTCCTTGCCCGCAGAACAACATCCGGGCCTTGGCTGGTCCACTTCTTGGGCTCGGCCCAATGCTTCTTGGGCTATTTCCTCATGTGGGCCGCCGTCGCCGGCCTCCTTCCGCAGGTTCCGGTGCCGCTTATGTGCCTGTTTATGTTCGTTGCAGCCCATGCTCAGAGCTACTTTAACACTGCTAATGTTGTCACCGGCGTTCATAATTTCCCTAGCTACAGTGGAACCATCGTCGGCATTATGAAGGGGTTTCTTGGTCTCAGTGGAGCAATATTAATTCAAGTGTATCGAACAATATTCAACAACAAGCCTATGTCATATCTTCTGATGTTGGCACTCTTACCACCTATCAATACTTTGCTGCTTATGTGGTTTGTAAGAATCCAAAACACTCATGAGAGAGAGGAAAGGAAGTATCTAAATATATTTTCTTCCATGGCTGTGGTTGTTGCTGCATATCTTATGGTTGTTATAATCCTAGAGAACATCTTTATTCTGCATTTACCGGTCCAAATCTTTATATTCATTGTGCTTATTGTGTTGCTAGCCTCACTTCTTTGTATTGCATTTAAAGCACATGAAAAGGTGTCTAGTAGTGCTTCAGAAAGTTTTCTTGATGAGGGGTCCCAACTAATTGTGGAGCCAGCACCCCTGGATACTGAGAAGATGGATGCAAGGCAAGATTCTTCCTACAACCCTTTGCCTGATACTAACAATCAAAGGGCTTTGCAACTAGGAGACAACTTGAATCTTTTCCAAGCAATGAAAACTTTGAACTTTTGGATTTTGTTTGTTTCTATGGCATGTGGAATGGGATCAGGACTTGCAACAGTTAATAATATGGGCCAAATAGGGGAATCCCTTAGTTATACCAACCATGAGACAAGTTCCTTGGTTGCTTTGTGGAGCATTTGGAATTTTATTGGCCGCTTTGGAGCTGGTTATGTATCAGATTATTTTTTACACACAAGAGGATGGGCAAGACCTTTATTTATGGTCATCACTTTGATGATCATGAGCATTGGCCATGTGGTGATTGCTTATGGACTGCCAGGTGCTCTGTATGTTGGTTCAATTTTGGTGGGTATTTGTTATGGCTCTCAGTGGTCTCTAATGCCCACAATCACTTCTGAGATATTTGGTGTGGGACATATGGGAAGCATATTCAACACCATTACCATAGCAAGCCCAGTGGGATCTTATATATTCTCTGTTAGAGTAGTTGGGTATATATATGATAAAGAAGCATCAGAAGGAAATACATGCATTGGAACTCATTGTTTTATGTTTCCTTTTCTCATAATGGCATCTGCAACTATTCTGGGTTCTGTGACAGCTCTAGGCTTGTTTTTGCGGACCAAAAACTTTTATGCTCAGGTTGTACTGAGAAGAATTCAAAATATTCTGTGA 1629 0.4266 MEHVNLNFYLNSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDIVSVFKDIGANVGVISGLLYDFLARRTTSGPWLVHFLGSAQCFLGYFLMWAAVAGLLPQVPVPLMCLFMFVAAHAQSYFNTANVVTGVHNFPSYSGTIVGIMKGFLGLSGAILIQVYRTIFNNKPMSYLLMLALLPPINTLLLMWFVRIQNTHEREERKYLNIFSSMAVVVAAYLMVVIILENIFILHLPVQIFIFIVLIVLLASLLCIAFKAHEKVSSSASESFLDEGSQLIVEPAPLDTEKMDARQDSSYNPLPDTNNQRALQLGDNLNLFQAMKTLNFWILFVSMACGMGSGLATVNNMGQIGESLSYTNHETSSLVALWSIWNFIGRFGAGYVSDYFLHTRGWARPLFMVITLMIMSIGHVVIAYGLPGALYVGSILVGICYGSQWSLMPTITSEIFGVGHMGSIFNTITIASPVGSYIFSVRVVGYIYDKEASEGNTCIGTHCFMFPFLIMASATILGSVTALGLFLRTKNFYAQVVLRRIQNIL. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03182 542 CDD MFS_Mch1p_like 12 515 - -
Seca4g03182 542 Gene3D MFS general substrate transporter like domains 185 519 IPR036259 -
Seca4g03182 542 SUPERFAMILY MFS general substrate transporter 213 529 IPR036259 -
Seca4g03182 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 531 - -
Seca4g03182 542 SUPERFAMILY MFS general substrate transporter 16 207 IPR036259 -
Seca4g03182 542 Pfam Nodulin-like 13 262 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03182 Seca-Chr4 54476679 54478938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03182 10 540 Nodulin-like Gene Family AT1G74780 55.166 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03182 - - lja:Lj1g3v0437880.2 899.042