Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03160 ATGTCATACCCTAGTCATGCTATTGGTAAAGCTGTGGTTGCTACAGCTGTGGCAATGTTATTCATTGCAGGGATTTTCTTTTACTTCCTCCAAAAATTTGTTCTTGCTAGGTACCACCAGAGACACAAAGTTGCTGCAAGTTATCTTCGAGAACAAGGAGTGAACCATGAAGATATAAGAAAAGCTGGTGGTAATGTGAAAGCACTAATTGTAGAAGAAAATGGGGTTGATATTCTTTATATGATGGACACAGAAAGCAGACAATTGATAACTGGATTCCCAAATAGTATGTTCAATCCAAGTTATGAAGATGATGAAGAAGAAAAGAGAATAATAGATGTCATGGTCCAAAGGTCCAAAATATCCAAACCTCATGAGACTCCACTGGCATGTGAATCTCCAGGGTTGAGTGGTCATCAAATTCTAGTTAAACCAGTAGCACAACAAGTATCTACCCTGCCACATTCACTTGAATTAGCACCTCTATTTCCAAAACCTTCACCACCACCACCTCCTCCTCCTCCACCACCACCACCAAGAAAGGAAATTCCAAAGGCACCACCTTTGCCTTCTTATTCCACCATGTATAGAAAAAGTGCACCACCACCACCTGGTCCACCTCCACTTCCAAAGGCCAAAGGGTTTAATTCATCACTGAAACCCCCACCAGTGCCTAAAGTGAAAGCAAACATCAAAAACACCAAAGAGGGTACAATAGGGGAGAGCTCAAGAGAAAAGGGTGCTGGCCAAACTAGGCTGAAGCCTCTACATTGGGATAAGGTTGTAGCTAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTTCGGTTTGATGATGAACTCATGGAATCACTCTTTGGATATTCAACCAGTGATAAAACCAATGAAAGAAACATGAGTCTTTCAACTTTGGCCAAGTCTAATTCCAACACACCAACTCAAATATTCATTCTGGAGCCAAGAAAATCTCAAAACACAGCAATTGTTCTGAGATCACTAGCAGTTTCTCGCAAGGGAATCTTGGATGCATTACTTGATGGTCAAGGACTCAGTGTTGAGACACTTGAGAGACTCACTAAAATAGCTCCCTCTCAAGAAGAAGAAGCCAAAATTATGCAGTTCAGTGGCAACCCTGATAAGCTTGCTGATGCTGAGTCTTTCCTATACTACATCCTGAAAGCAGTTCCAACAGCATTCAATCGTTTGAAAGCAATGCTTTTCAGGTCCAATTATGATTGTGAAGTTCTTCAGCTTAAGGAACACCTACAAACACTTGAACTGGGTTGTAAGGAACTGAGGACTAGTGGCCTTTTTTTGAAACTCCTTGAGGCTATTCTCAAAACTGGGAACAGGATGAATTCTGGAACTTCAAGAGGCAATGCACAAGGTTTCAACCTGAGCACTCTTAGAAAACTTTCTGATGTGAAAAGCACAGATGGGAAGACTAGTTTGCTTCACTTCATTGTGGAACAAGTAGTTCAATCAGAAGGGAAAAGGCAAGCTATAAATAAAAAGCACAACTTTCTCATAAGCAATGGTGAAACATGCAATATGATACAACAAGAGGAAGACAGAGAATATCTAATGCTTGGTTTAGCAGTGTTAGGTGGGCTAAGTGATGAGTTATCTGAAGCAAAAAAAGCTGCTAGCATTGAGTATCACAATTTCATCACTATGTGTTCCACTCTCAGTGCTCATGTAGTTGAAATTCGACAGATTATAACATGCTGTGGCAACACTGAGAGAGGTGGATTCATCAAGGAAATGAAAGGGTTCCTAGAGGAATGTGAGGAGGAGCTTAAGGTGGTGAAAGAGGAACAAACAAGGATCATGGAGCTTGTGAGAAAAACAAATGAGTACTATCTAGCAGGAGCATCTAAAGACAATATGTCAAACCCCTTTCAGCTGTTTGTTATTGTAAAAGATTTTGTTGACATGGTAGATCAAGCTTGCATAGAACTTAAAAGGAAGCTAGAAAAGAAGAATGCAGGAGTAAAGGCTTTATCAACACCACCTTTGTCACCATCAAAGAGGGCACCACTCAGATTCCCTAACTTTGATTTATATTTTCTGTCAAATAAGTCAGAAACTACATATTCAAGCCAATCAGAAGATGATTTCTGA 2136 0.4031 MSYPSHAIGKAVVATAVAMLFIAGIFFYFLQKFVLARYHQRHKVAASYLREQGVNHEDIRKAGGNVKALIVEENGVDILYMMDTESRQLITGFPNSMFNPSYEDDEEEKRIIDVMVQRSKISKPHETPLACESPGLSGHQILVKPVAQQVSTLPHSLELAPLFPKPSPPPPPPPPPPPPRKEIPKAPPLPSYSTMYRKSAPPPPGPPPLPKAKGFNSSLKPPPVPKVKANIKNTKEGTIGESSREKGAGQTRLKPLHWDKVVANVDHSTVWDQINDGSFRFDDELMESLFGYSTSDKTNERNMSLSTLAKSNSNTPTQIFILEPRKSQNTAIVLRSLAVSRKGILDALLDGQGLSVETLERLTKIAPSQEEEAKIMQFSGNPDKLADAESFLYYILKAVPTAFNRLKAMLFRSNYDCEVLQLKEHLQTLELGCKELRTSGLFLKLLEAILKTGNRMNSGTSRGNAQGFNLSTLRKLSDVKSTDGKTSLLHFIVEQVVQSEGKRQAINKKHNFLISNGETCNMIQQEEDREYLMLGLAVLGGLSDELSEAKKAASIEYHNFITMCSTLSAHVVEIRQIITCCGNTERGGFIKEMKGFLEECEEELKVVKEEQTRIMELVRKTNEYYLAGASKDNMSNPFQLFVIVKDFVDMVDQACIELKRKLEKKNAGVKALSTPPLSPSKRAPLRFPNFDLYFLSNKSETTYSSQSEDDF. 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03160 711 Gene3D Formin, FH2 domain 265 673 IPR042201 -
Seca4g03160 711 ProSiteProfiles Formin homology-2 (FH2) domain profile. 243 677 IPR015425 -
Seca4g03160 711 SMART it6_source 243 666 IPR015425 -
Seca4g03160 711 MobiDBLite consensus disorder prediction 159 251 - -
Seca4g03160 711 PANTHER FORMIN-RELATED 7 689 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca4g03160 711 MobiDBLite consensus disorder prediction 161 186 - -
Seca4g03160 711 Pfam Formin Homology 2 Domain 248 651 IPR015425 -
Seca4g03160 711 MobiDBLite consensus disorder prediction 197 211 - -
Seca4g03160 711 SUPERFAMILY Formin homology 2 domain (FH2 domain) 201 665 - -
Seca4g03160 711 Coils Coil 590 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03160 Seca-Chr4 54093653 54096262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03160 8 709 FH2 protein (formin) Gene Family AT1G70140 39.973 1.96e-163 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03160 - - gsj:114409782 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03160 4 54093653 54096262 Seca4g03160 4 54093653 54096262 ECH