Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03156 ATGGTTTGGTTGGCTATATCTGCTGTGGAATTGAATTTAAAGTTTATGAGATGGCGGTCACACTTGGATGCTAGGTTGCGTGTAGGCTTATCGCGAGCACGAGCTGGAATAAAAGAAGTTCACTTCCTTCCATTCAATCCAACAGATAAAACAACTGCACTTACATACATTGATGTTGCTGGTAAGATGCACAGGGTTAGCAAAGGTGCACCAGAACTGCACTTACATACATTTGATGTGCATTTTAGATTGCAAAAACCTTGGATCATTTACAGTAAGATTTTTTTTATGGAAATGTTTCTCACTGAAAAACAAGTTATAGACATATATTCATGA 336 0.375 MVWLAISAVELNLKFMRWRSHLDARLRVGLSRARAGIKEVHFLPFNPTDKTTALTYIDVAGKMHRVSKGAPELHLHTFDVHFRLQKPWIIYSKIFFMEMFLTEKQVIDIYS. 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03156 111 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 27 73 IPR023299 GO:0000166
Seca4g03156 111 Gene3D - 18 86 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03156 Seca-Chr4 54042603 54044269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03156 32 76 Primary Pumps ATPases AT5G62670 80.000 3.64e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03156 K01535 - pop:18105052 82.4185