Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03152 ATGTACTATGTTCCTGTGTTCTTCATTGGGGGTGCAGATTATGCGGGGGCACTAGCCTATGGTAGTAGGATTGCTAGGCATGAATGTGTGATTGTGTCAATGGTTAGGTTTGAGATTATGGATGAAGTGGTAAAATATGGAATAGAGATGTCTTCACGTATCACAAAATTGATAAATTATTTTGATTTAGTAATGGTGGGGAGGGAGCATCCACAGTCTGTTTTGCTTCAGGGATATGATCAATGGAGTGAATGTCCAGAGTTAGGGCAAAAGCCTAAGAGGATTTGGTTAGGCACATTCCCTACACCTGAAATGGCTGCTGTTGCCTATGCTGTTGCTGCTTTTGCTCTTAAGGCCAGTGCTGCTGCTGCTGGGGCAGCAAAGGATAAGTTGTGTGACCTTGTCGTTGTCTTGGTTATGTTAGGCTTCTCTCAATTCACAGGAACATCAGATAAGTTGTCTGTTAGTCTCTTTAGTCTTAACATAATAGTAAGAGAACATTGGATAAGTTCCCTTGAAGCCATGCTATTTGAAGGGTCATACAGCAAACATTTGATGGGAATTGCACTTTCTCTGCTTATTTCTTTTGAAATATGA 597 0.4121 MYYVPVFFIGGADYAGALAYGSRIARHECVIVSMVRFEIMDEVVKYGIEMSSRITKLINYFDLVMVGREHPQSVLLQGYDQWSECPELGQKPKRIWLGTFPTPEMAAVAYAVAAFALKASAAAAGAAKDKLCDLVVVLVMLGFSQFTGTSDKLSVSLFSLNIIVREHWISSLEAMLFEGSYSKHLMGIALSLLISFEI. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03152 198 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Seca4g03152 198 SUPERFAMILY DNA-binding domain 87 119 IPR016177 GO:0003677
Seca4g03152 198 SMART rav1_2 81 133 IPR001471 GO:0003700|GO:0006355
Seca4g03152 198 ProSiteProfiles AP2/ERF domain profile. 59 127 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03152 Seca-Chr4 54021626 54025288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03152 4 89 Antiporter Super Family AT1G06970 35.484 5.14e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03152 K26731 - gmx:100811954 111.694