Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03062 ATGGAAGAAACATTTGTTCCTTTCCGTGGGATTAAAAATGACCTTAAAGCAAGAATTGTGTGCTACAAACAAGATTGGACCAGTGGATTCCGAGCGGGTATCAGGATCCTTGCCCCGACTACATACATATTTTTTGCTTCAGCAATTCCTGTTATTTCTTTTGGAGAGCAACTAGAGAGAAATACTGATGGAACTCTCACTGCTGTGCAGACTCTTGCATCAACTGCACTCTGTGGTATTATCCACTCAATCATTGGAGGGCAGCCTCTCCTCATACTAGGTGTAGCTGAGCCAACAGTTCTGATGTATACATTCATGTATAACTTTGCAAAGGATCGAAAGGATTTGGGACACAAACTATTCCTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCCCTGTTGCTCTTCTTGCTGGCCATTCTTGGTGCATGCTCCATAATCCGCAGATTTACACGCCTTGCTGGTGAACTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTACCTAAGACCCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTAGTTTTGTCATTTGGCCTTCTTTATACCGGTCTACGAAGCCGCAAGGCTAGATCCTGGCGTTATGGGACAGGTTGGCTAAGGGGATTTATAGCTGATTATGGAGTCCCACTAATGGTTCTCATATGGACTGGTGTGTCTTACATACCTGTCAATAAGGTTCCAAGGGGAATCCCCAGGCGACTTTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCTCCCTTATACATTATTGGAGCATTTATACCAGCAACTATGATTGCGGTGCTTTACTACTTTGATCACAGTGTTGCATCACAACTTGCGCAGCAGAAGGAGTTCAATCTAAGAAAACCATCATCTTATCATTATGACTTGCTACTCCTGGGCTTTTTGACCATATTGTGTGGGCTTATTGGAATCCCTCCTTCCAATGGTGTGATTCCACAATCTCCAATGCATACAAAGAGCTTAGCTACTCTAAAACATCAGCTTTTACGGCATAAGCTTGTATCTACTGCACGAACAAGCATGCAGAAAAATGTGAACCTGACTCAGTTATACCAAAGTATGAAGGAAGCATATGATGTAATGCAGACTCCATTGGTTCCCCATATGGCACCCACCTTGGTAAATGGGCTGAAAGAGCTGAAGGAATCTACAATTGCACTGGTTTCAAGTCATGGATACATGGATGCCCCTGTTGATGAGGTTGTCTTTGATGTGAATAAGGATGTTGATGACCTTTTGCCTGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTGCAGGCATCGATGGTTGGGGCTTGTGTTGCTGCTATGCCTCTTTTAAAGAAGATACCAACTTCAGTACTTTGGGGTTACTTTGCCTTCATGGCAATTGAAAGCTTGCCAGGGAATCAATTTTGGGAGAGAATATTGTATCTTTTCACTGCTCCAAGTCGAAGATACAAACTGCTGGAGGAACACCATGCCACCTTTGTTGAGACTGTGCCCTTTAAAGCAATTGCCTTGTTTACTTTGTTCCAGACAGTTTACTTGCTTCTTTGCTTTGGCATAACATGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTAGTCCCAGTCCGTCAATATATTCTTCCCAAGTTTTTCAAAGGAGCTCATCTTCAAGAGTTGGACGCAGCAGCATATGAGGAATCACCTGCCATTGCTTTCAACATGTCCTTTGAAGATCCAAGTAACCAGGCATCAACAGCCCATATCAGTGGTGGGGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGAGAATTTCGCCACACTCACAGCCCCAAAACAACAAGTTCAACTCCAACTTCAACTTCAATAGGAGATATAAGACCTGCTAATAGCCCACACACAAACACGAAGGATTCCAAGCCCTCGAGTAACTGTATTGAGAGGGGAAAGCAGCCTAGGACCAACTGGGAAGGAGATGAAGTCAATGAAAACTCCTAG 2130 0.4371 MEETFVPFRGIKNDLKARIVCYKQDWTSGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLAILGACSIIRRFTRLAGELFGLLIAMLFMQQAIKGLVEEFGVPKTQREGTNQIALQSSWLFGNGMFALVLSFGLLYTGLRSRKARSWRYGTGWLRGFIADYGVPLMVLIWTGVSYIPVNKVPRGIPRRLFSPNPWSPGAYSNWTVVKEMLNVPPLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRHKLVSTARTSMQKNVNLTQLYQSMKEAYDVMQTPLVPHMAPTLVNGLKELKESTIALVSSHGYMDAPVDEVVFDVNKDVDDLLPVEVKEQRLSNLLQASMVGACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEHHATFVETVPFKAIALFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYILPKFFKGAHLQELDAAAYEESPAIAFNMSFEDPSNQASTAHISGGEILDEIITRSRGEFRHTHSPKTTSSTPTSTSIGDIRPANSPHTNTKDSKPSSNCIERGKQPRTNWEGDEVNENS. 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03062 709 MobiDBLite consensus disorder prediction 654 694 - -
Seca4g03062 709 MobiDBLite consensus disorder prediction 648 709 - -
Seca4g03062 709 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Seca4g03062 709 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016020
Seca4g03062 709 Pfam HCO3- transporter family 464 554 IPR011531 GO:0006820|GO:0016020
Seca4g03062 709 FunFam probable boron transporter 2 18 60 - -
Seca4g03062 709 Gene3D Helical hairpin bin 18 60 - -
Seca4g03062 709 PANTHER ANION EXCHANGE PROTEIN 2 612 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03062 Seca-Chr4 52521853 52528028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03062 1 681 Antiporters AT3G62270 74.855 0.0 1050
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03062 K24194 - gmx:100805633 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03062 4 52521853 52528028 Seca4g03062 4 52521853 52528028 ECH
Seca4g03062 4 52521853 52528028 Seca4g03062 4 52521853 52528028 PCT