Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03052 ATGATGTCTGCCATTTCACTCAGACACAACCCACAAGTAAGCTACACTCACCAGCAAGGTGAAACCATCACTGAAGAAATTGAAGGACTCATAAGAGTTCATAGAGATGGACATGTAGAAAGGCCAGCAATTGTGCCTAATGTCTCATGTACCATGCCATCACAACATGGTGTCACAGCCAGAGATGTTGTAATCAACAAAGACACCAATTTATGGGGACGGATTTATGTGCCATTGAACTGTCACAACAAGCTTCCTTTGCTTGTTTACTTCCATGGTGGTGGATTCTGTGTTGGCTCTGCTTCTTGGAGATGTTACCATGAGTTCTTGACCAATCTTGCTTCCAACGCATGTTGTGTTATTCTCTCTATAGACTACAAGTTAGCTCCTGAGAATCGTCTTCCAGCAGCATATGATGATGGTTTCAAAGCTCTCATGTGGGTGAAAAGTGAAGCTCTAAACACATCAAGTGTGCAAAAGTGGTGGCTGAGTCATTGCAAACTATCTTGCCTATTCCTAGCTGGTGATAGTGCAGGGGCAAACATAGCTTACAATGTAGCCACACGATCAAGCACCATTCTAAATCCATTATCTCTTAATGGTGTTATTTTGATCCAACCTTTCTTTGGAGGTGTGGAAAGAACTAGCTCTGAGAAGCATTCTCAACAGCCACTTAATTCAGCATTAACTTTATCAGTTTCTGACACTTTCTGGCGCTTAGCACTTCCTTTTGGGACTACACGTGACCATCCATATTGCAACCCTCTTGTACATGCCACTTCCAAATTGAGAGATTTGAGGCTACCCTCTATTATGGTATGTGTTTCAGAAATGGATATACTCAAAGACAGAAATCTGGAATTCTCAAACACTCTGGCAAAAGCAGGGAAAAGGGTTGAAACAGTTATCTTCAATGGTGTAGGCCATGCATTCCAAGTGCTGCATAATTATCCACTTTCCCATTCTCGCACCCAAGAAATGATATCTCGTATCAGGACCTTCCTGAATCAGTAA 1014 0.4211 MMSAISLRHNPQVSYTHQQGETITEEIEGLIRVHRDGHVERPAIVPNVSCTMPSQHGVTARDVVINKDTNLWGRIYVPLNCHNKLPLLVYFHGGGFCVGSASWRCYHEFLTNLASNACCVILSIDYKLAPENRLPAAYDDGFKALMWVKSEALNTSSVQKWWLSHCKLSCLFLAGDSAGANIAYNVATRSSTILNPLSLNGVILIQPFFGGVERTSSEKHSQQPLNSALTLSVSDTFWRLALPFGTTRDHPYCNPLVHATSKLRDLRLPSIMVCVSEMDILKDRNLEFSNTLAKAGKRVETVIFNGVGHAFQVLHNYPLSHSRTQEMISRIRTFLNQ. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03052 337 Pfam alpha/beta hydrolase fold 88 312 IPR013094 GO:0016787
Seca4g03052 337 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 171 183 IPR033140 -
Seca4g03052 337 Gene3D alpha/beta hydrolase 29 337 IPR029058 -
Seca4g03052 337 PANTHER ARYLACETAMIDE DEACETYLASE 27 314 - -
Seca4g03052 337 SUPERFAMILY alpha/beta-Hydrolases 29 337 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03052 Seca-Chr4 52267065 52268078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03052 2 336 Carbohydrate Esterase AT5G16080 51.437 1.47e-118 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03052 - - gmx:100819429 537.339