Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02983 ATGGAATCTGGAGGTAGGTTCTATTCAGTTGATGAGTTCAAATTGGACCCCAAATGGCTGATTGATCCTAAGCATCTCTATGTTGGGCCACGGATTGGAGAGGGAGCTCATGCCAAAGTCTATGAGGGAAAATATAAAGACCAAACTGTTGCCATTAAAATTGTACATAAAGGAGAAACTGTTGAAGAAATTGCTAAGAGAGAGGGCCGCTTTGCAAGGGAGGTGGCTATGTTGTCTAGAGTGCAACATAAGAACTTGGTGAAGGACTACTTGTTATATGCCAAGTTTCCAACAGCTGACAGTAAATATTGCCACTCTGTTTCTCAACAGTTTATTGGTGCCTGCAAGGAGCCAGTGATGGTGATAGTCACTGAGCTGTTATTAGGAGGAACATTGCGTAAGTATTTGCTTAACATGCGCCCCAAATGCTTGGATACACATGTTGCCGTTGGTTTTGCACTTGATATAGCACGTGCTATGGAGTGCCTGCATTCTCATGGGATCATCCACCGTGATCTGAAACCTGATAACTTGCTATTGACTGAGGACCAGAAAACAGTCAAGCTAGCAGATTTTGGTTTAGCTAGAGAAGAGTCATTAACTGAGATGATGACCGCTGAAACAGGAACTTACCGTTGGATGGCTCCAGAGTTGTATAGTACTGTCACACTGAGACAGGGGGAGAAGAAGCATTACAACCATAAAGTTGATGCTTATAGCTTTGCAATTGTGTTGTGGGAGCTCTTACACAACAAAGTTCCCTTTGAAGGCATGTCAAATCTACAGGCAGCATATGCCGCAGCCTTTAAGAATGTAAGGCCAAGTGCAGAACATCTTCCTGAGGAATTAGCTATAATTCTCACCTCATGTTGGCAAGAGGATGCAAATGCCCGACCCAACTTCACTCAGATAATCCAAATGCTCCTAAATTATCTTTACACAGTTACACCCCCTGAACCTGCAATTCCTTCAAGAATATTCACTTCTGAGAACACAGTCTTGCCACCAGAATCCCCTGGTACTAGCTCCTTAATGGCGAAACGCGATGACACAGGTGATACACCCAGAGCAAAGGATGAAATCAAGCCTAATGGTTTTCTTTGCTGCTTCAGTCAATGTTATTAA 1125 0.4329 MESGGRFYSVDEFKLDPKWLIDPKHLYVGPRIGEGAHAKVYEGKYKDQTVAIKIVHKGETVEEIAKREGRFAREVAMLSRVQHKNLVKDYLLYAKFPTADSKYCHSVSQQFIGACKEPVMVIVTELLLGGTLRKYLLNMRPKCLDTHVAVGFALDIARAMECLHSHGIIHRDLKPDNLLLTEDQKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKVPFEGMSNLQAAYAAAFKNVRPSAEHLPEELAIILTSCWQEDANARPNFTQIIQMLLNYLYTVTPPEPAIPSRIFTSENTVLPPESPGTSSLMAKRDDTGDTPRAKDEIKPNGFLCCFSQCY. 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02983 374 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Seca4g02983 374 MobiDBLite consensus disorder prediction 330 358 - -
Seca4g02983 374 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 21 308 - -
Seca4g02983 374 MobiDBLite consensus disorder prediction 330 348 - -
Seca4g02983 374 Gene3D Phosphorylase Kinase; domain 1 14 98 - -
Seca4g02983 374 Gene3D Transferase(Phosphotransferase) domain 1 129 317 - -
Seca4g02983 374 FunFam serine/threonine-protein kinase HT1 129 329 - -
Seca4g02983 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Seca4g02983 374 PRINTS Tyrosine kinase catalytic domain signature 162 180 IPR001245 GO:0004672|GO:0006468
Seca4g02983 374 PRINTS Tyrosine kinase catalytic domain signature 236 258 IPR001245 GO:0004672|GO:0006468
Seca4g02983 374 PRINTS Tyrosine kinase catalytic domain signature 124 137 IPR001245 GO:0004672|GO:0006468
Seca4g02983 374 PRINTS Tyrosine kinase catalytic domain signature 279 301 IPR001245 GO:0004672|GO:0006468
Seca4g02983 374 ProSiteProfiles Protein kinase domain profile. 26 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g02983 374 SUPERFAMILY Protein kinase-like (PK-like) 17 336 IPR011009 -
Seca4g02983 374 Pfam Protein tyrosine and serine/threonine kinase 29 308 IPR001245 GO:0004672|GO:0006468
Seca4g02983 374 SMART serkin_6 26 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g02983 374 CDD STKc_MAP3K-like 32 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02983 Seca-Chr4 51106560 51111095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02983 9 374 MAP Kinase Kinase Kinase AT5G50180 76.503 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Seca4g02983 Pkinase 7.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02983 - - gmx:100796593 671.774