Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02962 ATGGCTCTACATCTGCCATCATTTCTGAAGCAAGTTTCATATGATCAAAATGCCACTCTTTCCATGTTTCTTTCCTTCTTCGTCAGTATGCTTCTGGTGATTAAGCTCATAAGAAGCAGAAAATTGAACCTACCCCCATCCCCACCTAAATTGCCAATAATTGGAAATTTCCATCAACTAGGAACACTGCCTCATCGCACTTTCCAAACCCTCTCACAAAAGTACGGTCCTTTGATGTTCTTGCATCTGGGTCAGCTTCCCCTGTTGCTGGTTTCCTCTGCAGACATGGCCAGAGAAGTCCTGCAAACCAATGACGTGGCTTTTGCAAGTAGGCCTCACCTCACATCAGCAAAAGCCTTACTCTACGGTTGTAAGGACATTGCGTTTGCATCGTATGGTGAAACATGGAGACAGAAAAGGAAACTATGTGTACTTGAGTTTCTAAGCATGAAAAGGGTGCAGTCAATTCAGTTTATCAGAGAAGAGGAAGTTGGGGCATTTGTTGATAAGATACGTAAAGCATGCTTCAATGATGGTACTTGCTCTGTGAACCTTAGTCAGATGCTGATTGCAACCACAAACAACATAATCTGTAGGTGTATATTTGGAAGGAAGTATGATGTTGAAGGTGGTAGATTTGCTGAGCTAGGGAGAAAGGTGATGGCTCAGATTTCAGATTTCAGTGTGGGAGATTTGTTTCCTTTGTTGGGTTGGGTTGATGTTCTCACTGGCCAAATTCAAAAGTTTAAGGCAACTAATGGAGCATTGGATGATTTCTTTGATCAAGTGATTACAGAACGTAAGATGACAAGGAGGGATTTTGAAAAGAAGAAAGACTTCCTTGATATTCTCCTTCAACTACAGGAAAGTGGCATGTCAGAGTTTGAGCTCACCCAAGATGATTTAAAAGCACTTGTTTTGGACATGTTTTTGGGAGGGAGTGAAACAACGTCAACAACAGGGGAATGGGCTATGGCAGAGCTCATGAAAAACCCTCTTACAATGAAGAAAGCTCAAGGGGAGGTAAGAAGAGTTGTAGGGAATAAATCAAAAATTGAGGACAATGATGTGAATCAAATGAACTACTTGAAATGTGTAGTAAAAGAGACTCTGAGGTTACATCCAGCTGCTCCTCTTTTGGCTCCTAGAGAAACAACATCTAGTGTTAAAATTGGAGGGTATGATATTCCTAATAAAACAATGGTGTATATCAACGCATGGGCAATTCAAAGGGACCCTGAATTGTGGGAAAGGCCTGAAGAGTTTATACCGGAGAGATTTGAAAATAGCAAAGTTAATTTCAATGGTCAAGACTTTGAATTTATACCATTCGGTTCTGGGAGAAGAAAATGCCCTGGTATGGCATTTGGGCTTGTTTCGGCAGAGTATATGCTTGCTAATCTTTTGTATTGGTTCGATTGGGAGCTACCTACTGCTGTTCAAGAGTTAGACATGAGTGAGAGAAATGGTCTCACTGTCACAATGAAAGTACCTCTCTGTCTAAAACCAGTACCATACAACAATCTCTGA 1530 0.4111 MALHLPSFLKQVSYDQNATLSMFLSFFVSMLLVIKLIRSRKLNLPPSPPKLPIIGNFHQLGTLPHRTFQTLSQKYGPLMFLHLGQLPLLLVSSADMAREVLQTNDVAFASRPHLTSAKALLYGCKDIAFASYGETWRQKRKLCVLEFLSMKRVQSIQFIREEEVGAFVDKIRKACFNDGTCSVNLSQMLIATTNNIICRCIFGRKYDVEGGRFAELGRKVMAQISDFSVGDLFPLLGWVDVLTGQIQKFKATNGALDDFFDQVITERKMTRRDFEKKKDFLDILLQLQESGMSEFELTQDDLKALVLDMFLGGSETTSTTGEWAMAELMKNPLTMKKAQGEVRRVVGNKSKIEDNDVNQMNYLKCVVKETLRLHPAAPLLAPRETTSSVKIGGYDIPNKTMVYINAWAIQRDPELWERPEEFIPERFENSKVNFNGQDFEFIPFGSGRRKCPGMAFGLVSAEYMLANLLYWFDWELPTAVQELDMSERNGLTVTMKVPLCLKPVPYNNL. 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02962 509 CDD CYP71-like 74 499 - -
Seca4g02962 509 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 Pfam Cytochrome P450 45 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 Gene3D Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Seca4g02962 509 FunFam Cytochrome P450 83B1 32 502 - -
Seca4g02962 509 SUPERFAMILY Cytochrome P450 45 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g02962 509 PANTHER CYTOCHROME P450 71B11-RELATED 31 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02962 Seca-Chr4 50755465 50757576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02962 25 504 Cytochrome P450 AT5G25180 42.916 1.76e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02962 K20617 - cave:132175480 592.423