Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02898 ATGGTTTTTGAACCAGAAGAAGGGATATCATTCAAATATGTGGAGGAATTCAAAGTTTTTTACAGAAAATATGTTTTTCAACAAGGGTTTGGTTTTGTAATAAGAACCTCGGGAAAGAACTCCTCTGGTTGTGTTTGTAACCTTGTACTGGCATGTGCACGCCAAGGACATCGTACATCAACTATGCAGAACTCTTTCACGACCGTGTCATCAATTAAAGCTCAATATGGAACACATGTTACTGCTTGCTTAAAGTCTGATGGTTTGTATTACATAACCAAGGTCATTCTTGATCATTCTCATGAGCTAAGCCCAAGCAAAGAAAGATTGTTCAGGTCAAACAAAGAGATCAGCATGCATGTGATGAGAGTTCTGGATGTCAACGACAGGGCAGGGGTGAGATTGAACAAAAGCTTTCATTCCGTTGTTACAGATGTTGGGGGCCATGAAAAGTTGCCTTGTATTGAGAGAGACGCGAGGAATTATATCGTAAATGAAAGGCGAGCAATTGGCAAAGGTGGTGATAGTGAGGTTCTCAAGGGCTATTTTGATAGGATGCAAGAGCAAAATAGTGACTTTTTCAACGACATTGATTTGCATAGTGATCTTCATATTCAAAATGTGTTTTGGACAGATGCAAGAAGTAGGGCAGTATATGTGTCATTTGATGATGTCATTACATTTGATACAACCCATCTTACAAATAAGTATGATATGCCATTTGTTGCATTTGTTGGGGTTAATCATCATGGCCAACCAGTACTATTTGGATGTGGGTGGCAATGGCCAAAAATCATAAACTAA 804 0.3893 MVFEPEEGISFKYVEEFKVFYRKYVFQQGFGFVIRTSGKNSSGCVCNLVLACARQGHRTSTMQNSFTTVSSIKAQYGTHVTACLKSDGLYYITKVILDHSHELSPSKERLFRSNKEISMHVMRVLDVNDRAGVRLNKSFHSVVTDVGGHEKLPCIERDARNYIVNERRAIGKGGDSEVLKGYFDRMQEQNSDFFNDIDLHSDLHIQNVFWTDARSRAVYVSFDDVITFDTTHLTNKYDMPFVAFVGVNHHGQPVLFGCGWQWPKIIN. 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02898 267 Pfam MULE transposase domain 225 259 IPR018289 -
Seca4g02898 267 PANTHER OS01G0519700 PROTEIN 4 259 - -
Seca4g02898 267 Pfam FAR1 DNA-binding domain 20 104 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02898 Seca-Chr4 49941104 49941907 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g02898 FAR1 2.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02898 - - psat:127087122 289.656