Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02817 ATGGATACAAACTTGACTCTAAAAGTTGGTCTTGAATACGATAATTTAGAAGATGCATGGCAATTTTGGGTGAATTACGGAGGCATAAAAGGCTTTGGAGTTAGAAAACAATATTCAAGCAAGAGTAAGAAAGATGGTTATGTTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACTACGGAAACCAGACTCAAGGGATTATAAAACGACCAATCCAAAACCTGAGACAAGAACGGTGTGTATGGCAAGAATGAAAGTCAAATGA 270 0.3667 MDTNLTLKVGLEYDNLEDAWQFWVNYGGIKGFGVRKQYSSKSKKDGYVTSYLYVCCKEGVLRKPDSRDYKTTNPKPETRTVCMARMKVK. 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02817 89 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 89 - -
Seca4g02817 89 Pfam FAR1 DNA-binding domain 21 89 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02817 Seca-Chr4 48728718 48728987 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g02817 FAR1 1.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02817 - - vun:114184605 152.525