Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02815 ATGAGCTTCATCACCGGTGAGACCTTCGACACGTGTCAGAGGGAGAAGCGCAAGAGCATCAATGGCAATGACTTGCTTTGGGCCATGACCACCTTAAAATTCAAGGACTACGTTGAGCCTCTCAAGCTATACCTCCAGTACTTTAGAGAGATCGAAGGAGAGAAAATCGTCGCGACGCGTGACAAGGATATCAATGTCGCTCCTTCCACCGCCGTCGGTGGGTAG 225 0.5111 MSFITGETFDTCQREKRKSINGNDLLWAMTTLKFKDYVEPLKLYLQYFREIEGEKIVATRDKDINVAPSTAVGG. 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02815 74 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 2 56 IPR027113 GO:0001228|GO:0006355|GO:0016602
Seca4g02815 74 SUPERFAMILY Histone-fold 2 55 IPR009072 GO:0046982
Seca4g02815 74 Gene3D Histone, subunit A 1 70 IPR009072 GO:0046982
Seca4g02815 74 PRINTS CCAAT-binding transcription factor subunit A signature 12 30 - -
Seca4g02815 74 PRINTS CCAAT-binding transcription factor subunit A signature 31 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02815 Seca-Chr4 48671450 48671674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02815 1 55 CCAAT-HAP3 Transcription Factor Family AT4G14540 78.182 1.35e-28 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02815 K08065 - jre:108985290 108.612