Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02763 ATGGCCATAAGCACTCCAGGCATCTTGGTGATTCGCATAAGCTCTGGGTCACTCTGCTTTGCCAATGCTAATGTTGTCAGAGAAAGAATACTTAAGTGGGTCACGGATGAAGGAGATGATAATAAAGAAACTGCCAAGGGAAAGGTCCAAGCAATAATCTTGGACATGACCAACCTGATGAATGTTGATACTTCCGGAATTATAGCACTGGAGGAACTTCACAAGAGGTTGATTTCACATGGTGTACAATTGGCTATGGTCAACCCAAGGTGGTTAGTAATTCACAAGCTTAAACTTGCAAACTTTGTGGATAAAATGGGAAATGAATGGGTTTTCCTAACTGTTGCTGAAGCTGTGGATGCATGTCTGTCTACTAAATTCGCTGAGCCATGA 393 0.4224 MAISTPGILVIRISSGSLCFANANVVRERILKWVTDEGDDNKETAKGKVQAIILDMTNLMNVDTSGIIALEELHKRLISHGVQLAMVNPRWLVIHKLKLANFVDKMGNEWVFLTVAEAVDACLSTKFAEP. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02763 130 PANTHER SULFATE TRANSPORTER 6 123 IPR001902 GO:0016020|GO:0055085
Seca4g02763 130 CDD STAS_SulP_like_sulfate_transporter 2 115 - -
Seca4g02763 130 Gene3D STAS domain 1 127 IPR036513 -
Seca4g02763 130 ProSiteProfiles STAS domain profile. 15 122 IPR002645 -
Seca4g02763 130 Pfam STAS domain 4 118 IPR002645 -
Seca4g02763 130 SUPERFAMILY SpoIIaa-like 5 122 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02763 Seca-Chr4 47599881 47600550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02763 1 126 Inorganic Solute Cotransporters AT5G10180 52.344 2.16e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02763 K17469 - gmx:100776591 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02763 4 47599881 47600550 Seca4g02763 4 47599881 47600550 ECH
Seca8g02049 8 43827402 43828701 Seca4g02763 4 47599881 47600550 PCT