Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02697 ATGGAACTAGGGAAGATGGTTTTGAAGTACCCTTACAATGGTTTTGGTTTGACTAGAATAGTGTCACAACTTGCACCACAGTTTTATACCAAAGAAGACTTGAATCAAATAGAGGAACTCCACAAAAAGTTTTGGCAAGAATCATCTTTACATAATAACACAACGGAAGAGACAAAGTCAATGAATAATAACGTGAAAAGGTGTCACGAAACTAATGAAGGCAAGTTTGAAGGAGGAAAAAGAATCAAACTAATTATGATGAAAAAGTCAACATCACCACCGCCACAACCAGATTTGCCTGATCAATTCATGAATCGAATAAGAGAGTTAGATGGTAGTGATGTGAGGTATGTCATGTACAAGAAGTTGAGCAACACGGATGTCAATGTAAACAACAATCGTCTTTCAATGACAAGCAAACAAATCAGGTGTGATTTATTCACTGAAAGAGAGAAAGCAATCTTGTGTTCAACGGATGAAGACAATCGACCTGTTGGTTTGGAAGTGGTTGTCTTGGACCCTTCCCTTAGAGAATTTGATATAACCTTGAAGAAGTGGGACATGCAGAGTACAAGTGTTTACAATCTAGTTAAAAATTGGAAACTTATTTTATCGCAGAATAATTTGCAAGTAGACCATGAATTCCACATTTGGTATTTTAGGGTCAGTAATAAAGTATACTTTATATTGAGCAATAAGGATCCCTAG 708 0.3616 MELGKMVLKYPYNGFGLTRIVSQLAPQFYTKEDLNQIEELHKKFWQESSLHNNTTEETKSMNNNVKRCHETNEGKFEGGKRIKLIMMKKSTSPPPQPDLPDQFMNRIRELDGSDVRYVMYKKLSNTDVNVNNNRLSMTSKQIRCDLFTEREKAILCSTDEDNRPVGLEVVVLDPSLREFDITLKKWDMQSTSVYNLVKNWKLILSQNNLQVDHEFHIWYFRVSNKVYFILSNKDP. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02697 235 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 42 231 IPR005508 GO:0003677
Seca4g02697 235 Gene3D - 97 234 IPR015300 -
Seca4g02697 235 Pfam B3 domain-containing protein At2g31720-like 101 204 IPR005508 GO:0003677
Seca4g02697 235 SUPERFAMILY DNA-binding pseudobarrel domain 118 230 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02697 Seca-Chr4 46339723 46340430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02697 107 230 B3 DNA Binding Superfamily AT1G05930 23.016 5.77e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02697 - - cam:101490092 197.208