Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02667 ATGAGGAAGGATGATGTTATTCGAGACAAAAAAAGTATGGTCATAATGTGGCAGTATTTATGTAGTAAGGCTGGTATGAGGGACAAAAAGCATTTGATTAGGTTAGATCGAAAAAAGGAGCACAGACCCCTTACCCGTACCAATTGTCTAGCAAAGTTGAGAGTTAGGTTTGATTACAAGACGGGTAAATGGAAGGTTGTTTCATTTGAAGAATCTCACAACCATGAATTAACCCCTGCAAAGTTTGTACCTCTAATTCCTAATTATATGGGATTGACTGATGGGGACAAAGCCCAAGTGGATGCATTACATTCTCATGGCATTAGGCCTTGCCAGATTATGGGTTTTCTTGTTGATCAAAAAGGAGGGTATAGAAATGTTGGATTTTCAAAGAAAGATTTGTACAACTACATAGATGAGGTTAAACGTGGTAAGATAAAAGATGGGGATGTTTTTGCTGGCTTAAGTTATTTGCAAGGAAAGGCGGATAATAATCCAATGTTTTTTTCAAGATTTTTATGTTCTGAGGATGGTAAACTTACTCATCTATTCTGGTGTGATGCAAATAGTCGTGCGGATTTTTAA 585 0.3709 MRKDDVIRDKKSMVIMWQYLCSKAGMRDKKHLIRLDRKKEHRPLTRTNCLAKLRVRFDYKTGKWKVVSFEESHNHELTPAKFVPLIPNYMGLTDGDKAQVDALHSHGIRPCQIMGFLVDQKGGYRNVGFSKKDLYNYIDEVKRGKIKDGDVFAGLSYLQGKADNNPMFFSRFLCSEDGKLTHLFWCDANSRADF. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02667 194 PANTHER OS01G0519700 PROTEIN 2 194 - -
Seca4g02667 194 Pfam FAR1 DNA-binding domain 8 78 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02667 Seca-Chr4 45924101 45924685 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g02667 FAR1 1.4e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02667 - - ccaj:109794460 261.536