Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02645 ATGGCGGCTTTTACATCCATTGCTCTACAATATTCATCCACATCATCTTTACAATCCTTGGTACCTTCTCTAGAAGGTACACGTGATCATAATTCATGGTGGGTGAGAGTAAGATCAAGCAAATCCACAGGTCAAAGATTACACTCACAGAAAGCTGCAAGAGGGCTAACAATCCAGAGTGCAGCCACAAAACCAGCAAAGACGCCAGCTGAAGAAGACTGGAAGGTTAAGAGAGAACTTCTGTTGCAAAAAAGGGTAAGAAGTGTGGATGTAAAGGAAGCTCTGCGCCTTCAGAAAGAAAATAATTTTGTGATTCTCGACGTAAGGCCAGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCCATCAATGTACAAATATATAGGCTTATCAAAGAGTGGACAGCATGGGACATTGCCAGGCGTGCTGCATTTGCATTTTTTGGTATTTTTGCTGGCACAGAAGAGAACCCCGAGTTCATCCCAAGTACAATACATTTACCTCATCATGCATTTCTGGAATTCATACATTTCTTTTTCTTCTGA 546 0.4212 MAAFTSIALQYSSTSSLQSLVPSLEGTRDHNSWWVRVRSSKSTGQRLHSQKAARGLTIQSAATKPAKTPAEEDWKVKRELLLQKRVRSVDVKEALRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIPSTIHLPHHAFLEFIHFFFF. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02645 181 Gene3D - 80 158 IPR036873 -
Seca4g02645 181 CDD RHOD 93 141 - -
Seca4g02645 181 Pfam Rhodanese-like domain 91 131 IPR001763 -
Seca4g02645 181 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 18 162 IPR043186 -
Seca4g02645 181 MobiDBLite consensus disorder prediction 44 70 - -
Seca4g02645 181 ProSiteProfiles Rhodanese domain profile. 99 125 IPR001763 -
Seca4g02645 181 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 85 145 IPR036873 -
Seca4g02645 181 MobiDBLite consensus disorder prediction 44 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02645 Seca-Chr4 45511587 45515228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02645 1 163 Sulfurtransferasese or Rhodanese AT4G27700 61.310 1.10e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02645 - - gmx:100797443 269.626