Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02609 ATGGCCTTGTCAAGCCCACACCTACAAAGATTCCTGTTAAGCAAGCTTCATCATGGCCGCTCCTCAACTCCTCACAGAAACAGCACCTTCACCATTACCACCAGAACCCGCCGCTGCTGCTCTGCCATAGCCATTGATGCTCCTTCATCATCTTTGACTGACTCTCCTGCTATTCGATGGGGATCCATAGCTTTGCAGGGTTCCCGTGAAGAGATGGAAGATGATATTATTGTCCGATCCGATGGCCTTGGCGGTTTCTCTTTTGCAGCTGTCTTTGATGGCCATGGAGGGTTTTCTTCCGTCAAGTTCCTCAGGGATGAACTGTACAAGGAGTGTGTTGAAGCTTTACAAGGTGGGTTACTATTAGTTGGGAATGATTTCAAGGTCATTAGAGAAGCATTGCAAGAGGCATTTCTCAAGGCTGACTCGAGATTGTTAAAATGGCTTGAAATGAATGGGGAGGAGGAGGATGAATCAGGTGCTACGGCAACTACGGTGTTCATAGGAGATGATAACTTGCTAATTTCACATCTTGGTGACTCATCTGCGGTTCTATGCAGATCTGGAAAAGCAGAAGTGCTGACTATCCCTCACCGGCCATATGGGAACAACAAGACTTCTCTTCAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGCTTGTCAATGGTAGAATTTGTGGAGACATTGCTGTATCTCGTGCATTTGGGGACATGCGATTCAAAACAAAGAAGAATGAGTTATTTACCTTTTTGCATGTGAAAAGGATGCTGCGAAAAGGGGTTCAGGAAGGAAGATGGTCAGAAAAGTTTATTTCTCGTGTACAGCTCAACAATGACTTGGTTGTTGCATTACCTGATGTTTATCAAGTAGCTCTTGGCTCAGATGCAGAATTTGTAGTATTAGCATCAGATGGCTTATGGGATTACATGAGCAGCTCAGATGCAGTTTCTTTTGTGAGGGATCAGCTACGAAAACACGGAAACATACAGCAAGCTTGTGAAGCGCTTGCAGAAGCCGCTTTGGATCGGCGCACACAGGATAATGTCAGCATTATAATTGCCGATTTAGGGCGGACAGACTGGCAGAATTTGCCACTGCAGCAACAAAATGTGATATTTGAGCTAGTCCAAGCCCTTGCCACCATTGTAATTGTATCAATTGGGATCTGGTTTTCATCACAGCTTTCTTTATAG 1197 0.4478 MALSSPHLQRFLLSKLHHGRSSTPHRNSTFTITTRTRRCCSAIAIDAPSSSLTDSPAIRWGSIALQGSREEMEDDIIVRSDGLGGFSFAAVFDGHGGFSSVKFLRDELYKECVEALQGGLLLVGNDFKVIREALQEAFLKADSRLLKWLEMNGEEEDESGATATTVFIGDDNLLISHLGDSSAVLCRSGKAEVLTIPHRPYGNNKTSLQEIKRIREAGGWLVNGRICGDIAVSRAFGDMRFKTKKNELFTFLHVKRMLRKGVQEGRWSEKFISRVQLNNDLVVALPDVYQVALGSDAEFVVLASDGLWDYMSSSDAVSFVRDQLRKHGNIQQACEALAEAALDRRTQDNVSIIIADLGRTDWQNLPLQQQNVIFELVQALATIVIVSIGIWFSSQLSL. 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02609 398 SUPERFAMILY PP2C-like 55 358 IPR036457 -
Seca4g02609 398 SMART PP2C_4 49 355 IPR001932 -
Seca4g02609 398 Gene3D - 58 363 IPR036457 -
Seca4g02609 398 FunFam Protein phosphatase 2C 57 58 364 - -
Seca4g02609 398 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Seca4g02609 398 ProSiteProfiles PPM-type phosphatase domain profile. 59 357 IPR001932 -
Seca4g02609 398 CDD PP2Cc 58 357 IPR001932 -
Seca4g02609 398 Pfam Protein phosphatase 2C 61 350 IPR001932 -
Seca4g02609 398 PANTHER PROTEIN PHOSPHATASE 2C 53 355 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02609 Seca-Chr4 44663399 44667858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02609 1 334 PP2C-type Phosphatase Gene Family AT4G27800 61.791 3.16e-148 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02609 K04457 - gmx:100784071 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02609 4 44663399 44667858 Seca4g02609 4 44663399 44667858 ECH