Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02604 ATGCCATCAAGCTTTAACCATCACTCAGTATGGTATGAATCGATTTTGAAATCGATCTCTAACTCAACAGAAATTCTCTACACCTACAACAATGCAATTCATGGATTCTTTACAAGGCTAACAGCTGAAGAAGCTAGATTGCTAAAGAGCCAGATCGGAGTTCTAATGGTGTTTCCAGATAAACAATACAAGCTCCACACAACAAGAACCCCACACTTCCTTGGCCTTGACAAAATCCAGGGCATATTCCTCGAGACAAATGGTAAAGAAGGTAGTGACGTAATTGTTGGACTCCTCGATACTGGTGTTTGGCCTGAAAGCAAGAGCTTCGACGATACTGGATTTGGACCCATCCCTAGAACCTGGAAAGGAAAATGTGAAACAGGTACCAATTTCTCAACCTCGAATTGTAATAAGAAATTGATTGGAGCCAGGTTTTATACCATGGATTTATTATCGCCTCTGAGGGGTTCTATATCGCCTCGAGATGATGATGGTCATGGCACCCATACTGCAAGCACAGCTACAGGGTCTCCGGTGCAAAACGCGAGCCTTTTTGGATATGCTAATGGAACAGCACGTGGGATGGCCCCGAGCGCTAGAGTCGCTATGTATAAGGTTTGTTGGAATGAATCTTGTGTTGTTTCTGATATATTAGCTGCAATTGACCAGGCCATCATTGATAATGTAAATATCCTTTCCATTTCGCTCGGTGGTCCACAATTTGAGTACTATGAGGACCCTGTCGCAATCGGAGCTTTTTCGGCTATGGAGCATGGGATTCTAGTCTCTTGCTCTGCAGGAAACGCTGGTCCTGAACCCGCCAGTGCAACCAATATAGCACCTTGGATGATCACCGTGGGAGCTGGCACACTTGATCGAGATTTTCCTGCATACGTTAGAATCGGAAATGGACAAAATTATTCTGGAGTGTCTCTTTATAATGGAAATCCTTTGCCTGAACATCCATTTCCGTTCATATACGCAGGGAATGTAAGCAAAGACAAGTCCCCCAAGTTTAGATCTGAATATTGCTTGAAGGATAGCTTGGCGGCAGAAAAAGTTAAGGGAAAGATTGTATTGTGTGACCGTGGACAAAGTAGTAGGGTAGAGAAAGGAAATACGGTGAAATCTGTTGGTGGTTTGGGCATGGTTTTAGCTAATACGGACCTCGAAGGAGAGGAACTAGTGGCAGATGCCCATATTTTGCCTGCAACTTTAGTGGGCTCAAAAGAAGGTAATGCCATCAAGCAATACTTGTTTTCTAATCCAAAATCGACGGGTACAATTGTATTTCAGGGAACAAAGCTTGGAATTGAGCCATCACCGGTTGTTGCATCATTTAGCTCTCGAGGCCCTAATTCTATCACCCCAAAGATATTAAAGCCCGATTTGATCGCACCAGGTGTTAACATCTTAGCAGCATATTCAAGAAATGCGAGCCCCACTGATTTGGATTCAGATGATAGACGTGTGGACTTCAACATCATCTCGGGCACGTCCATGTCATGCCCTCATGTGAGTGGGCTAGCAACTCTAATCAAGTCGGCTCATCCAGATTGGAGCCCAGCTATGATTCGATCTGCACTGATGACCACGAGTCAACCATTGTTGGACAGTGCCAACAAAAAACCAGCAACACCGTTTGATTATGGTGCTGGACACGTGGACCCTGTTCCTGCACTTAATCCTGGACTGGTTTATGATTTGACAGTGGATAATTATCTAAGCTTCCTCTGTGCGTTAAACTACACAGCTGATAATATCGAAGTTGTGACGAGGAGAAAGTATAAGTGTGATCCAAACAAACAATATAGTGTAACCGACCTTAATTACCCTTCATTTATTGTGGTGTTTAAAAAGCCAGCAGGTAGGAATGGTCCAACAAATGTTAAACACATGCGAACTCTTACCAATGTGGGGTCTGCGGGAACGTACAAGGTATCGGTTAAGTTGGATATCCCAAATGTTAAGGTCTCGGTTGAGCCGGGAGTGTTGAGTTTCAAGGGGGGAAATGAGAAAAAATCATATACAATTACATTTTCAGCTACATTTCCAACAGCTAATGGAACAGCACGTGGGATAGCCCCAAGCGCTAGAGTCGCTATGTATAAGGTTTGTTGGAATGAATCTTGTGTTGTTTCTGATATATTAGCTGCAATTGACCAGGCCATCATTGATAATGTAAAGATATTAAAGCCCGATTTGATCGCACCAGGTGTTAACATCTTAGCAGCATATTCAAGAAATGCGAGCACCACTGATTTGGATTCAGATGATAGACGTGTGGACTTCAACATCATCTCGGGCACGTCCATGTCATGCCCTCATGTGAGTGGGCTAGCAGCTCTAATCAAGTCGGCTCATCCAGGTTGGAGCCCAGCTATGATTCGATCTGCACTGATGACCACGAGCTATACAACTTACAAGAATGGTCAACCATTGTTGGACAGTGCCAACAAAAAACCAGCAACACCGTTTGATTATGGTGCTGGACACGTGGACCCTGTTCCTGCACTTAATCCTGGACTGGTTTATGATTTGACAGTGGATAATTATCTAAGCTTCCTCTGTGCATTAAACTACACATATGATAATATTGAAGCTGTGACGAGGAGAAAGTATAAGTGTGATCCAAACAAACGATATAGTGTAACCGACCTTAATTACCCTTCATTTGTTGTGGTGTTTAAAAAGCCAGCAGGTAGGAATGGTCCAACAAATGTTAAACACATGCGAACTCTTACCAATATGGGGTTTGCAGGAACGTACAAGGTATCGGTTAAGTTGGATATCCCAAATGTTAAGGTCTCGGTTGAGTCGAGAGTGTTGAGTTTCAAGGGGGGAAATGAGAAAAAATCATATATAATTACATTTTCAGCTACATTTCCAACATCAATAATGAAACCGCAAGATGGTTTTGGACGTTTAGAATGGTCAGATGGGAAACATGTTGTGGGAATTCCAATTGCAGTTAGCTTGGAATGA 2988 0.4307 MPSSFNHHSVWYESILKSISNSTEILYTYNNAIHGFFTRLTAEEARLLKSQIGVLMVFPDKQYKLHTTRTPHFLGLDKIQGIFLETNGKEGSDVIVGLLDTGVWPESKSFDDTGFGPIPRTWKGKCETGTNFSTSNCNKKLIGARFYTMDLLSPLRGSISPRDDDGHGTHTASTATGSPVQNASLFGYANGTARGMAPSARVAMYKVCWNESCVVSDILAAIDQAIIDNVNILSISLGGPQFEYYEDPVAIGAFSAMEHGILVSCSAGNAGPEPASATNIAPWMITVGAGTLDRDFPAYVRIGNGQNYSGVSLYNGNPLPEHPFPFIYAGNVSKDKSPKFRSEYCLKDSLAAEKVKGKIVLCDRGQSSRVEKGNTVKSVGGLGMVLANTDLEGEELVADAHILPATLVGSKEGNAIKQYLFSNPKSTGTIVFQGTKLGIEPSPVVASFSSRGPNSITPKILKPDLIAPGVNILAAYSRNASPTDLDSDDRRVDFNIISGTSMSCPHVSGLATLIKSAHPDWSPAMIRSALMTTSQPLLDSANKKPATPFDYGAGHVDPVPALNPGLVYDLTVDNYLSFLCALNYTADNIEVVTRRKYKCDPNKQYSVTDLNYPSFIVVFKKPAGRNGPTNVKHMRTLTNVGSAGTYKVSVKLDIPNVKVSVEPGVLSFKGGNEKKSYTITFSATFPTANGTARGIAPSARVAMYKVCWNESCVVSDILAAIDQAIIDNVKILKPDLIAPGVNILAAYSRNASTTDLDSDDRRVDFNIISGTSMSCPHVSGLAALIKSAHPGWSPAMIRSALMTTSYTTYKNGQPLLDSANKKPATPFDYGAGHVDPVPALNPGLVYDLTVDNYLSFLCALNYTYDNIEAVTRRKYKCDPNKRYSVTDLNYPSFVVVFKKPAGRNGPTNVKHMRTLTNMGFAGTYKVSVKLDIPNVKVSVESRVLSFKGGNEKKSYIITFSATFPTSIMKPQDGFGRLEWSDGKHVVGIPIAVSLE. 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02604 995 Gene3D - 857 994 - -
Seca4g02604 995 Gene3D - 579 716 - -
Seca4g02604 995 SUPERFAMILY Subtilisin-like 690 846 IPR036852 GO:0004252|GO:0006508
Seca4g02604 995 Pfam Fibronectin type-III domain 887 992 IPR041469 -
Seca4g02604 995 Pfam Fibronectin type-III domain 609 693 IPR041469 -
Seca4g02604 995 ProSitePatterns Serine proteases, subtilase family, serine active site. 770 780 IPR023828 -
Seca4g02604 995 FunFam subtilisin-like protease SBT1.5 293 437 - -
Seca4g02604 995 CDD Peptidases_S8_3 63 534 IPR034197 -
Seca4g02604 995 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 681 IPR045051 -
Seca4g02604 995 Pfam Subtilase family 732 832 IPR000209 GO:0006508|GO:0008236
Seca4g02604 995 ProSiteProfiles Serine proteases, subtilase domain profile. 62 562 - -
Seca4g02604 995 FunFam Subtilisin-like protease SBT1.5 93 304 - -
Seca4g02604 995 Gene3D Peptidase S8/S53 domain 730 853 IPR036852 GO:0004252|GO:0006508
Seca4g02604 995 MobiDBLite consensus disorder prediction 158 178 - -
Seca4g02604 995 Gene3D - 293 438 - -
Seca4g02604 995 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 66 IPR037045 -
Seca4g02604 995 Pfam Subtilase family 91 554 IPR000209 GO:0006508|GO:0008236
Seca4g02604 995 CDD PA_subtilisin_like 299 430 - -
Seca4g02604 995 PRINTS Subtilisin serine protease family (S8) signature 91 110 IPR015500 -
Seca4g02604 995 PRINTS Subtilisin serine protease family (S8) signature 163 176 IPR015500 -
Seca4g02604 995 PRINTS Subtilisin serine protease family (S8) signature 498 514 IPR015500 -
Seca4g02604 995 Pfam PA domain 348 416 IPR003137 -
Seca4g02604 995 ProSitePatterns Serine proteases, subtilase family, serine active site. 499 509 IPR023828 -
Seca4g02604 995 SUPERFAMILY Subtilisin-like 65 566 IPR036852 GO:0004252|GO:0006508
Seca4g02604 995 Pfam Peptidase inhibitor I9 4 66 IPR010259 -
Seca4g02604 995 Gene3D Peptidase S8/S53 domain 93 575 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02604 Seca-Chr4 44568550 44579372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02604 731 993 Subtilisin-like Serine Gene Family AT5G67360 63.498 8.82e-101 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02604 - - gmx:100815413 931.784