Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02572 ATGTTTAATTTTATTATAATTGTGGATATAGGACGCAAAGGTGTCAAGGGTGAACAACCTGGTCTAGTTCTCTCATGGGCTCAAAGAGTTAAAATTGTTGTTGGTGCAGCTAGAGGACTTGAATATCTTCATGAAAAGGCAGAGACTCATATTATCCGTTGTTACATTAAGTCTAGTAACATAATGTTTTTCGATGATGATGTTGTAAAGATTGCAGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCACGACTTCATTCTACTCGTGTTCTTGGAACCTTTGGTTATCATGCTCCAGAATATGCAATGACTGGGCAACTCACTTCAAAAAGTGATGTTTACAGTTTTGGAGTTATATTGCTGGAACTCTTAACCGGGCGTAAACCTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGCTGGCCATTAA 456 0.3947 MFNFIIIVDIGRKGVKGEQPGLVLSWAQRVKIVVGAARGLEYLHEKAETHIIRCYIKSSNIMFFDDDVVKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVVVVVVVAAAAAAAVVVAGH. 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02572 151 SUPERFAMILY Protein kinase-like (PK-like) 20 133 IPR011009 -
Seca4g02572 151 Gene3D Transferase(Phosphotransferase) domain 1 14 143 - -
Seca4g02572 151 Pfam Protein kinase domain 26 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g02572 151 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 9 132 - -
Seca4g02572 151 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02572 Seca-Chr4 44096777 44097469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02572 24 132 Receptor kinase-like Gene Family AT4G02010 58.716 2.96e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Seca4g02572 Pkinase 2.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02572 K13436 - gmx:547595 223.787