Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02563 ATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTATTCAAAGCACCAGAACCTATTATTGAAGAGCCAGTCATGGACCTGGATCCTATGACAGCAGCCATCTCGATGATATCTTGTGGGGAAAATGTCACATCAGAGGGACTTAAATCCACAGATATTGATATTCTTCAAAATGAACAGTTTCTGAGTGAGGTATTCTATGAGTGCAAAAAGGATCTCTTAGAAAAGGCAGCAATAGAATCACCACTCTCTGAGATTCTGGAAATCAAGATTCCTGTTCTGAACATAGATGAGAACTCAATTCTAGAAAACAAGCCACTTCCTGACATGCCATTACCAAAGAGTGTCAGTTCAGGAAGTTTGAGCTCAATGGACTGGATGCATGGAGGTGCAATGAACCCTGCTTTCCTTGATATCCCAGGAATAGATTTCAATACAGTTTATGGCATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGCAATTTGAACATCATCCAATCTCCCCTTGAGAGGCCATTTCTTATCAGCAACTGTACCAGTGAGGAACGCCGACAAAAGCTCTCCAGATACAGGAACAAGAAGACGAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAAGCTCTTGCAGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAGGACTGATGAATCTGAGGCCAAGAGAGAATGA 717 0.4212 MSEYDLAAEGDLFKAPEPIIEEPVMDLDPMTAAISMISCGENVTSEGLKSTDIDILQNEQFLSEVFYECKKDLLEKAAIESPLSEILEIKIPVLNIDENSILENKPLPDMPLPKSVSSGSLSSMDWMHGGAMNPAFLDIPGIDFNTVYGMRRSFSEGDIKTLGNGNLNIIQSPLERPFLISNCTSEERRQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFARTDESEAKRE. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02563 238 Pfam CCT motif 188 230 IPR010402 GO:0005515
Seca4g02563 238 ProSiteProfiles CCT domain profile. 188 230 IPR010402 GO:0005515
Seca4g02563 238 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 123 232 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02563 Seca-Chr4 43853610 43858321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02563 184 235 C2C2-CO-like Transcription Factor Family AT5G24930 52.830 4.57e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca4g02563 CCT 2.5e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02563 - - gmx:100814332 415.231