Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02560 ATGGCACTTTCTAGAACTGGGCCAAACCCAATTCCGGAGAGTGATGGCTTAGCTTATTTGGCTAGAAATTTGTCGACAAGACTTGTGTTACCTGTTCCCCTACGTTTCACTGGACAGTTATCTAATCTAGGGAGAAGAAAGAACAAGGTAGTATGCTGCTCATCATTGAGGAAAGCTGCATCTGCATCTTCTATGGAATCACAGGAAGATGCTCCAAGTTCCTTTTCGGTTTGCTTGGAGGAGGAACTGGGTCATGTTATACGGTTCAAAATGTCAGACTTCAAGATTTTAAATCATGTTAGCATTGGCCTTGGTGGGCGGGCGGATGAGGTAGTTTTTGAAGGCAAGGTGAAGGATAGTGGTAGCCCTTTGTATAACACAAGAGTTGTACTTCGACAGCTTTCTAGTGCCCAAGCTCAGCGTCGAGGCAAACGAGCAATAGAGGTATTGAAGAAACTGGTTCACAGTAAACTTTTGTATCATTCTTACTCAATGCAAGTTCATGGCTATATCTCTTTGCCTGCCAATGATGGTGGTTCATTTATCCTTGTCCATGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACAGTCAGATTGGCTTCCAACTTTGGAGGCCACTCTTGCACTGGATGAAGAGTCTGTTAGGAAGGTAGGAGAAGAAACAACTGGAGGTCCTGCAGTTTCCAGGCAGTTGCGACTTATTCGAATATTGATGAGGGATCTTCTAATTGGGGTAAATTACCTGCATAGCCATGGTCTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGGCATATCAAAGTAGGTATACTGGGAAATGCTGCTGATTTTTATGAGGATGGTTCAAATAGTGTCTCTATGGACAACATGGACAGGCGACAGATGATGATTGCATTTGACATGAGGTATGGCCTGGAAAATTGTCAGTGA 957 0.4357 MALSRTGPNPIPESDGLAYLARNLSTRLVLPVPLRFTGQLSNLGRRKNKVVCCSSLRKAASASSMESQEDAPSSFSVCLEEELGHVIRFKMSDFKILNHVSIGLGGRADEVVFEGKVKDSGSPLYNTRVVLRQLSSAQAQRRGKRAIEVLKKLVHSKLLYHSYSMQVHGYISLPANDGGSFILVHGYHGSFSLRHWLQQSDWLPTLEATLALDEESVRKVGEETTGGPAVSRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNAADFYEDGSNSVSMDNMDRRQMMIAFDMRYGLENCQ. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02560 318 Gene3D Transferase(Phosphotransferase) domain 1 140 310 - -
Seca4g02560 318 SUPERFAMILY Protein kinase-like (PK-like) 89 292 IPR011009 -
Seca4g02560 318 ProSiteProfiles Protein kinase domain profile. 94 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02560 Seca-Chr4 43823969 43829587 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Seca4g02560 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02560 - - lja:Lj0g3v0108699.1 531.946