Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02484 ATGGAGGATTTGGGCATATTTTCAGTCATGTTGGCAATTGAGATGTTGGAAGTTACTGTCAACACTGTGAGCAAAGCAGCCATGAAGAGAGGCATGAATAACTTTGTATTTATCATGTACTCCAACGCCTTCACAGCTTGCTTCCTCCTTCCCTTAACCCTATTCTTTTATAGGAAACGTACTCTTCCGCCACTCACATATTGGAGCATTGGCCTATTATTTGTTGCTGGCTTTTTCAGTTGCACTATTCAGATGCTCAAGTTTTTTGGCATAGCTTACAGCTCTCCTACTTTGGCCTCAGTAATGTCTGATTTAGTCCCCGCTTTTACCTTCATACTTGCTGTCTTCTGCAGGATGGAAAATTTTGACTATAAAGCTAACAGCACTCAGGTCAAGTCTTATGGCACATTGGTATCAATCACTGGGGCTTTGATAATTACTCTGTACAAAGGCCAGCCAATCATAAACAACCATCCTAATTTCCCTGAAAATCTTCTTTCATCTGAGCAATTTGACTGGATATTTGGGGGAGTGTTGCTTGCGGCTTTTAGCTGTATGCTCTCATTCCATCATATAGTTCTGGTAATCAATACTCAATACATTTCTCAACAAGCATGGCTCAGAATATTGAGTTTACTTTTACTTTCTTCATTACTTCTAGACATGGTTAATCAGAGAGTACCCTGCAGAGCTTATGGTAGTACTTATTCGCAGCATGATAGTGTCTGTGCTATCTGTTCCAGCTGTGTTGATTTCAGAAAAAGACCCAAAAGCTTGGAGACTGGGACTTAA 792 0.404 MEDLGIFSVMLAIEMLEVTVNTVSKAAMKRGMNNFVFIMYSNAFTACFLLPLTLFFYRKRTLPPLTYWSIGLLFVAGFFSCTIQMLKFFGIAYSSPTLASVMSDLVPAFTFILAVFCRMENFDYKANSTQVKSYGTLVSITGALIITLYKGQPIINNHPNFPENLLSSEQFDWIFGGVLLAAFSCMLSFHHIVLVINTQYISQQAWLRILSLLLLSSLLLDMVNQRVPCRAYGSTYSQHDSVCAICSSCVDFRKRPKSLETGT. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02484 263 Pfam EamA-like transporter family 15 124 IPR000620 GO:0016020
Seca4g02484 263 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 148 - -
Seca4g02484 263 PANTHER WAT1-RELATED PROTEIN 7 207 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02484 Seca-Chr4 42378036 42379532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02484 2 193 Nodulin-like Gene Family AT5G40240 42.157 5.89e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02484 - - gmx:100804032 269.24