Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02481 ATGGGGAAAGTGTCAGTTCCTTTTGTGGGAATGATTATGGCGGAGTGTGCTCAAGTTGGCTTAATCATATTGAGCAAACAAGTCATGGCACAAGGGATGACCAATTTCATATTCATCTTCTACTCAAATGCAATCGCTTCCCTTCTTCTCCTTCCCACTTCCTTCCTTGTCCACAGATTTGAACGTCCTCCAATCACGTTTTCCACCCTTTGTGGATTTTTCTTACTTGGACTACTCGGTTATTTGGCGCAGGCTTTTGGGTACGCTGGGATTTACTACAGCTCAGCAACACTAAGCACATCCATGCTCAATCTTGTTCCTGGTTTTACTTTCATACTTGCCGTTGTTTTTAGAATGGAACAATTAGATTGGAGTAGCTCTAGCAGCCTAGCTAAATCATTGGGAACAGTAGTATCGATTGCTGGTGCATTTATTGTGACATTGTACAAGGGCCCTGCACTTTTGATGGGACTATCACCTGAAAACTCATCTCAGCAGCCAGTTTCCTCACAAGATTCTAATTGGATACTCGGAGGATTATTTCTTGCTGTTGACTGTGTGATGGCTTCAGCATATATTATTGTACAGGCTTCTATCCTTAAGAAATATCCAGCAGAGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCTGCTGTGACCAGTTTGGTTGTGGAAAGAGACTTAAGTGCTTGGAGCTTGGAACCTAAGTTTAGGTTGCTTGCAGTTTTATACTCGGGAATCTTTGGCTCTGCATTTCAAGTTGGTGTTATTACTTGGTGTTTGCACCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCTTTAGGAATCGTCATATCGGTTGTTATAGGTGTTCTCTTCCTTGGGGATGCATTCTATCTTGGAAGAAAGGAGCGGCCACCTTTCACTTTCTCTTTGTTTATGCGTTTCTTGCTCCTGGGTTTTACAGGAATAACCATGACTCAGAGCTTTTTATTCCTGGGTCTAAGCTACAGTTCCCCAATACTTGTGTGTGCCATGGGACAATTGATCCCAACGTTTAGTTTCCTGCTCTCTGTCACTCACAGGAAAACAGAGTTGAATTTTAGAAGCTCTGCTATCCAAGTCCAAGTGATTGGTATTTTGATATCAATAATGGGAGCAGTGCTAGCTGAATTCTTCAAGGGGCCACTTATAAGACCCTCTTCTCACCACCTTCAACACACAAAGCAACTTTTTGTCTTCTCATCAACTCCAGAATTTTGGGTTCTTGGTGGTGTTTTGCTTGCTGCAGCTTCCTTCTCAATTGCACTTTCGAACTTCATCCAGAAAGAAACTGTTCAGCAATATCCAGAACCAATGAAGGTGGTGTCTTATTATTGCTTGCTTGGAACGATCCTTAGTGCAATAGTCTCATGGATAGTGGAGGGGGACGCAAATGCTTGGAAGCCAAAGCGTAACATGGAGCTCATTCTCATCGTTCTAACTGCAATATTTGGGGGTGTGATTCGTCCCAATATTCAAGTTTGGTTCACTCGCATGAAGGGTCCAAATTATGTGCCACTATTCAAGCCCTTTGGTATTGCTTTTGCCACCACTTTTGGAGTTTGCTTCTTTCCTAATAGCCTTCATTATGGAAGTGTGATAGGAGCAGCTATAATTGGAATGGGGTATTATACAGTATTGTATGGAGAAATATCGAAAGGAGATGAAGAAGAGAAAGGAGGTGACGAAAGCTCAGATTCTTTGGACAAGAAGATACCTCTGTTGCAAGAAAAGATGGAAGTGTAA 1782 0.4198 MGKVSVPFVGMIMAECAQVGLIILSKQVMAQGMTNFIFIFYSNAIASLLLLPTSFLVHRFERPPITFSTLCGFFLLGLLGYLAQAFGYAGIYYSSATLSTSMLNLVPGFTFILAVVFRMEQLDWSSSSSLAKSLGTVVSIAGAFIVTLYKGPALLMGLSPENSSQQPVSSQDSNWILGGLFLAVDCVMASAYIIVQASILKKYPAELIVVFFYCFFVAIQSAVTSLVVERDLSAWSLEPKFRLLAVLYSGIFGSAFQVGVITWCLHQTGPVFVSMFKPLGIVISVVIGVLFLGDAFYLGRKERPPFTFSLFMRFLLLGFTGITMTQSFLFLGLSYSSPILVCAMGQLIPTFSFLLSVTHRKTELNFRSSAIQVQVIGILISIMGAVLAEFFKGPLIRPSSHHLQHTKQLFVFSSTPEFWVLGGVLLAAASFSIALSNFIQKETVQQYPEPMKVVSYYCLLGTILSAIVSWIVEGDANAWKPKRNMELILIVLTAIFGGVIRPNIQVWFTRMKGPNYVPLFKPFGIAFATTFGVCFFPNSLHYGSVIGAAIIGMGYYTVLYGEISKGDEEEKGGDESSDSLDKKIPLLQEKMEV. 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02481 593 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 150 - -
Seca4g02481 593 MobiDBLite consensus disorder prediction 566 593 - -
Seca4g02481 593 PANTHER WAT1-RELATED PROTEIN 6 298 IPR030184 GO:0016020|GO:0022857
Seca4g02481 593 Pfam EamA-like transporter family 422 559 IPR000620 GO:0016020
Seca4g02481 593 Pfam EamA-like transporter family 178 297 IPR000620 GO:0016020
Seca4g02481 593 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02481 Seca-Chr4 42351777 42362127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02481 289 592 Nodulin-like Gene Family AT1G70260 44.375 9.05e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02481 - - gmx:100804932 489.96