Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02480 ATGGAGGCTAAGAATAAGACTAAGATGTCAGAAGTGATTCCATTCATAGTAATGGTTATAATGGAAGGGTGCACTATAGCACTGACCATTTTTGCAAAAACTGAAATAACAAAAGGAATGAGCCCATTTGTGTTCATTGTTTATACCAATGCTCTGGCCACTATAATACTCTTTCCATGTTCCTTTCTATTTCACCACAAGGACAGAAAGGAGCAGCCACCTTTCACTTTCTCTTTGTTTATGCGTTTCTTGCTCCTGGGTTTCACAGGAATAACCATGACTCAGAACTTTTTATTCCTGGGTCTAAGCTACAGTTCCCCAATACTTGTGTGTGCCATGGGACACTTGATCCCCACGTTTAGTTTCCTGCTCTCTGTCATTCACAGGAAAACAGAGTTGAATTTGAGATGCTCTGCTATCCAAGTCCAAGTGATTGGTATTTTGGTATCGATAATGGGAGCAGTGCTAGCTGAATTCTTCAAGGGGCCACTTATAAGACCCTCTTCTCACCACCTTCGACAAACTAAACAACTTTTTGTCTTCTCATCAACACCAGAGTTTTGGGTTCTTGGTGGAATTTTGCTTGCTGCAGCTTCATTCTCAGTTGCACTTTCCAACTTTATCCAAAAAGAAACTGTTCAGCAATATCCAAAACCAATGAAGGTGGTGTCTTATTATTGCTTGCTTGGGACGATCCTTAGTGCAATAGTCTCATGGATAGTGGAGAGGGACGCAAATGCTTGGATGTTAAAGCGTAACATGGAGCTCATTCTCATCGTTTTAACTGCAGTATTTGGGGGTGTGATTCGTCCCAATGTTCAAGTTTGGTTCACTCGCATGAAGGGTCCAAATTATGTGCCACTGTTCAAGCCCTTTGGTATTGCCTTTGCCACCACTTTTGGAGTTTGCTTCTTTCCTAACAGCCTTCACTATGGAAGTGTGATAGGAGCAACTATAATTGGAATGGGATATTATACAGTATTATATGGAGAATTCAAAGGAGATGAAGAAGAGAAAAGCTGTAACGAAAGTTCAGATTCTTTGGACAAGAAGATACCTCTGTTGCAAGAAAAGATGGAAGTGTAA 1086 0.4079 MEAKNKTKMSEVIPFIVMVIMEGCTIALTIFAKTEITKGMSPFVFIVYTNALATIILFPCSFLFHHKDRKEQPPFTFSLFMRFLLLGFTGITMTQNFLFLGLSYSSPILVCAMGHLIPTFSFLLSVIHRKTELNLRCSAIQVQVIGILVSIMGAVLAEFFKGPLIRPSSHHLRQTKQLFVFSSTPEFWVLGGILLAAASFSVALSNFIQKETVQQYPKPMKVVSYYCLLGTILSAIVSWIVERDANAWMLKRNMELILIVLTAVFGGVIRPNVQVWFTRMKGPNYVPLFKPFGIAFATTFGVCFFPNSLHYGSVIGATIIGMGYYTVLYGEFKGDEEEKSCNESSDSLDKKIPLLQEKMEV. 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02480 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Seca4g02480 361 PANTHER WAT1-RELATED PROTEIN 14 337 IPR030184 GO:0016020|GO:0022857
Seca4g02480 361 Pfam EamA-like transporter family 16 156 IPR000620 GO:0016020
Seca4g02480 361 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02480 Seca-Chr4 42329547 42332128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02480 6 360 Nodulin-like Gene Family AT1G70260 50.678 3.85e-127 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02480 - - vum:124840741 582.408