Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02450 ATGCAGGAGGACCGAGAGAACATTTGGAGGGCTAGAGCCACTAGGAAAGTTGTTATGACTAGTCCTTTCAGACTGTTGGATTCTCATCATCTTGGTGTGGTTTTAACATTTCCTGTTTACAAATCTAAGCTCCCTCCAAAGCCAACAACAGAAGGACGCATTAAAGCAACAGTAGGGTATGTCCTAGTTTCACTTTTGTTTGCTTTGTCAAGTATTTTTTTTGAATTTGCTAGTGGGTTTCTCTCTTATGGTTCATATGAGTGA 264 0.4015 MQEDRENIWRARATRKVVMTSPFRLLDSHHLGVVLTFPVYKSKLPPKPTTEGRIKATVGYVLVSLLFALSSIFFEFASGFLSYGSYE. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02450 87 ProSiteProfiles CHASE domain profile. 1 65 IPR006189 -
Seca4g02450 87 Gene3D CHASE domain 1 73 IPR042240 -
Seca4g02450 87 Pfam CHASE domain 3 65 IPR006189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02450 Seca-Chr4 41926068 41926331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02450 2 61 Histidine Kinase Gene Family AT2G01830 73.333 1.81e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02450 K14489 - gmx:100818481 104.375