Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02443 ATGGTACCTCCGGGTCCAGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTTCACCCTCTCTTTTGAGATCAAATTCAGGGATGTTAGGAGGTCAAGGGGGTCCCCTGCCTTCGCAGACATCTTTCCCTTCACTTGTGTCTCCTCGTACTCAGTTCAACAATATGAATATTCTAGGAAATATGTCCAATGTAACTTCTATACTGAATCAATCTTTCCCAAATGGAGTTCCAAATCCTGGGCTCACTGGTCCAGGAAGTAGCCAGCGTGGAGGGATTGATACTGTAGCTGAAACTGATCCACTCTCCAGTGTTGGCAATGGAATGAACTTCAGCAATTCTTCATCCTCATTTGTACAATCAAATATGGTGAATGCTGGTCCCTCTGGTCAGGGTCAGGGTCAACAATTTTCAAACCCTTCTAGTAACCAGCTTTTGCCAGATCAACAACATTCCCAACAGCTTGAACCTCAAAATTTCCAACACAGCCAGCAGTCAATGCAACAGTTCTCTGCTCCTCTGAATACACAGCAGCAGCATTTTCAGTCAATTCGAGGAGGGATAGGTGGTATGGGACCAGTGAAGATGGAGCCCCAGGTAAACAATGATCAACTTGGACAGCAACAGCAGCAGCAGTTGCAATCTTTAAGGAATCTTGCTCCAGTGAAATTGGAACAACAACAACAAACGCAGACAATGAGAACTCTGGCACCAGTTAAAATGGAGCCCCAGCATTCTGATCAACCATTATTTTTGCAGCAGCAACAGCAACAACAACATCAACAGCAACAGCAGCAGCAGCAGCATCAGCAACAACAACAGCAGCAATTCCTCCACATGTCAAGGCAATCTTCTCAGGCTGCTGCTGCTCAGATCAATCTTTTACACCATCACAGGCTTTTGCAGTTACAACAACACCAACAACAACAACTCCTGAAGGCAATGCCTCAACAACGGCCTCAACTACCACAGCAATTTCAACAGCAGAATATGACTATAAGGTCTCCTGTGAAACCAGTATATGAACCGGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAATATCGAGTTCTGGAGGAAGTTTGTAGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCTATGTATGGAAGTGGCAGACAAACTACTGGTGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGCTTTGAAGCAACTGTTGAGGTTCTTCCCAGGCTTTTCAAGATAAAGTATGAAAGTGGTACTTTGGAAGAGCTACTTTATATTGACATGCCCCGTGAATATCATAATTCCTCTGGCCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGCCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCTAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGTCTTTTACTCAAAATGCAACACCCAATATATCTGCTCCAGAGTTACAAAATAATTGTAACATGTTTGTTGCATCAGCCCGTCAATTGGCTAAAGCCTTAGAAGTTCCATTAGTTAATGACTTAGGATATACAAAGAGATATGTGCGCTGTCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACAGGAACTGGACCTATGGAGAGCTTAGCCAAATTCCCCCGGAGAACAAGTGGTTCAATTCGTAGTCAAGCACAACAGCATGAAGATCAATTACAGCAGCAGCAGCAGCAAATGGTGGCTCATAACTCAAATGGTGATCAAAACTCAGCACAAGCTTCTGCCATGCAAATTGCTTCAAGCAATGGTATGGTTAGTGTAAATAACTCTGTCAACTCAGCATCCGCATCAACCACCACAAGCACTATCGTTGGACTTCTCCACCAGAACTCTATGAATTCTCGACAACAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCCCCAGGTTCCTCCAGTACTGTGCCACAGGCTCAACCAAACTCATCTCCTTTTCAATCACCAACACCATCCTCATCTAACAACCTCCCACAAACATCTCACCCTGCTTTAACATCTGCCAATCACATGAGTACAACAAACTCACCGGCTAATATTTCCTTGCAACAACAGCCATCTATTTCTGGTGAAGCTGACACTAGCGATGCTCAAAGTTCAGTCCAGAAAATCATACATGAGATGATGATGTCCTCCCAGATTAATGGCACAGGTGGAATGGTAGGTGTTAATTCTCTTGGAAATGACCTGAAAAATGTAAACGGTATTCTGCCAGGGAGTGGTAATACAGGGCTCAACAGTGGCCACGGCAGCATGGTGAGCAATGGCACACTGAACAATAATTCAGGTGTTGGGGTTGGTAGTTATGGAACAATGGGTCTTGGTCAGTCTACTATGCCTAATGGAATCAGAGCTGCTATGGTAAATAATTCAATCATGAATGGAAGGGGAGGAATGGCTTATATTGCTCGGGATCAAGCTATGAATCATCAACAGGATTTGTCAAACCAACTACTTAGTGGGTTAGGAGCAGTAAATGGTTTTAGTAATCTTCAATTTGATTGGAAACCTTCACCTTGA 2760 0.4359 MVPPGPGPPTPIGGAQSVSPSLLRSNSGMLGGQGGPLPSQTSFPSLVSPRTQFNNMNILGNMSNVTSILNQSFPNGVPNPGLTGPGSSQRGGIDTVAETDPLSSVGNGMNFSNSSSSFVQSNMVNAGPSGQGQGQQFSNPSSNQLLPDQQHSQQLEPQNFQHSQQSMQQFSAPLNTQQQHFQSIRGGIGGMGPVKMEPQVNNDQLGQQQQQQLQSLRNLAPVKLEQQQQTQTMRTLAPVKMEPQHSDQPLFLQQQQQQQHQQQQQQQQHQQQQQQQFLHMSRQSSQAAAAQINLLHHHRLLQLQQHQQQQLLKAMPQQRPQLPQQFQQQNMTIRSPVKPVYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYIDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQSFTQNATPNISAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGSIRSQAQQHEDQLQQQQQQMVAHNSNGDQNSAQASAMQIASSNGMVSVNNSVNSASASTTTSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPQAQPNSSPFQSPTPSSSNNLPQTSHPALTSANHMSTTNSPANISLQQQPSISGEADTSDAQSSVQKIIHEMMMSSQINGTGGMVGVNSLGNDLKNVNGILPGSGNTGLNSGHGSMVSNGTLNNNSGVGVGSYGTMGLGQSTMPNGIRAAMVNNSIMNGRGGMAYIARDQAMNHQQDLSNQLLSGLGAVNGFSNLQFDWKPSP. 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02443 919 Coils Coil 611 638 - -
Seca4g02443 919 MobiDBLite consensus disorder prediction 14 48 - -
Seca4g02443 919 PANTHER LIM DOMAIN-BINDING PROTEIN 248 908 IPR029005 -
Seca4g02443 919 Coils Coil 252 275 - -
Seca4g02443 919 MobiDBLite consensus disorder prediction 247 282 - -
Seca4g02443 919 MobiDBLite consensus disorder prediction 593 650 - -
Seca4g02443 919 Pfam LIM-domain binding protein 349 603 IPR029005 -
Seca4g02443 919 MobiDBLite consensus disorder prediction 687 780 - -
Seca4g02443 919 MobiDBLite consensus disorder prediction 241 282 - -
Seca4g02443 919 MobiDBLite consensus disorder prediction 70 184 - -
Seca4g02443 919 MobiDBLite consensus disorder prediction 1 48 - -
Seca4g02443 919 MobiDBLite consensus disorder prediction 70 213 - -
Seca4g02443 919 MobiDBLite consensus disorder prediction 609 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02443 Seca-Chr4 41813347 41820332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02443 8 915 C2H2 Transcription Factor Family AT1G43850 59.958 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02443 - - gmx:100799771 1387.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02443 4 41813347 41820332 Seca4g02443 4 41813347 41820332 ECH