Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02439 ATGTCTCAGGGAAGAGGCAGTGCATCTTTACCTATGGTTATGGTCACTGTGATTTCACTACTGTGCCTGTTGGTTCTGGTGGAACGTGCTAATGCAGCAACTTACACCGTTGGAGGACCTGGGGGCTGGACCTTCAACACTGATACTTGGCCCAATGGAAAAAAGTTTAGAGCTGGTGATATGCTAATCTTCAACTACGACTCAACGGCACACAATGTGGTTGCTGTGGACAGAAGCGCATACAGCAGCTGCAATACACCTGCAGGGGCTAAAGTGTTCAGTTCAGGGAAGGACCAAATCAGGCTAGCCAGAGGGCAGAACTACTTCATATGCAACTATCCTGGTCACTGCCAATCTGGTATGAAGGTTGCCATCAATGCAATCTGA 387 0.4832 MSQGRGSASLPMVMVTVISLLCLLVLVERANAATYTVGGPGGWTFNTDTWPNGKKFRAGDMLIFNYDSTAHNVVAVDRSAYSSCNTPAGAKVFSSGKDQIRLARGQNYFICNYPGHCQSGMKVAINAI. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02439 128 CDD Plantacyanin 33 127 IPR041844 -
Seca4g02439 128 Pfam Plastocyanin-like domain 43 121 IPR003245 GO:0009055
Seca4g02439 128 PANTHER BLUE COPPER PROTEIN 27 126 IPR039391 GO:0009055
Seca4g02439 128 ProSitePatterns Type-1 copper (blue) proteins signature. 105 121 IPR028871 -
Seca4g02439 128 FunFam basic blue protein-like 33 127 - -
Seca4g02439 128 SUPERFAMILY Cupredoxins 33 127 IPR008972 -
Seca4g02439 128 Gene3D - 33 127 IPR008972 -
Seca4g02439 128 ProSiteProfiles Phytocyanin domain profile. 33 128 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02439 Seca-Chr4 41749135 41750344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02439 1 128 Phytocyanin Superfamily AT1G17800 40.876 8.68e-28 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02439 - - gmx:100788635 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02439 4 41749135 41750344 Seca4g02439 4 41749135 41750344 ECH