Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02407 ATGGAGACAAACACTGAAATGAAAGGTAAGGTTCTTGCATTGAATGCCAGAAGAATACTAAAAACAAAGGTTCTTGCATTAGATAACATTGCCACTTCTGACATTAAATGCAAGATCCTTGGCTTTCATTTCACTGTTTATCTGCATATTCTCGCCTTCTCTCTTGCTCGTAGACAACAGACAAAGGGAACTTTTGTGTTTGAAATCAGAGCCACAGATACAGAACCAAAGCTTCCCACCCACAATTATTCTCATGAGTCCTCCAATCCCCTCTCACAACAAAGTGAATGCGTGTATAAACCCTTTGTTGTGAGAGGGGATTGGAGGAATAATGAGAATAACTGTGGGAAGCTTTTGTTCTTTATCTGTGGCTCTAATTTCAAACACAAGAGGTCCTTCAAAGACCATGTTCGTGCCTTTGGTGATGGACATGCTCCTCATACTGTTGAGAGTTGTGATCAACGGGAAATATTAGGGGGTGAGGAGGATGATGAATTAGAAGGAGAAGAAGATGAAGATGATCACGACAACAACAACAATCATAGTGGTAGGATATTTGGTTTTAATTAA 570 0.3982 METNTEMKGKVLALNARRILKTKVLALDNIATSDIKCKILGFHFTVYLHILAFSLARRQQTKGTFVFEIRATDTEPKLPTHNYSHESSNPLSQQSECVYKPFVVRGDWRNNENNCGKLLFFICGSNFKHKRSFKDHVRAFGDGHAPHTVESCDQREILGGEEDDELEGEEDEDDHDNNNNHSGRIFGFN. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02407 189 PANTHER ZINC FINGER PROTEIN WIP2 99 170 IPR043584 GO:0003700|GO:0010468
Seca4g02407 189 MobiDBLite consensus disorder prediction 157 174 - -
Seca4g02407 189 MobiDBLite consensus disorder prediction 144 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02407 Seca-Chr4 41037812 41039120 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02407 78 150 C2H2 Transcription Factor Family AT1G13290 60.274 4.67e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02407 - - adu:107490921 112.079