Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02406 ATGGAGACAAACACTGAAATGAAAGCTAAGGTTCTTGCGTTGAATGCCAGAAGAATACTAAAAACAAAGGTTCTTGCATTAGATAAGACTGCCACTTTTGGCCCTAAATTCAAGATCCTTGGCTTTCATTTCATTGTTTATCTGCATCTTCTAGCACTCTCTCTTGCTTGTAGACAACAGACAAAGGAGATTGGAGGGCTTATTAGAATAACTGTGGGAAGCTTTGGTTTTGTATCTGTGGCTCTGATTTCAAGCATAAGAGATCCTTCAAAGACCAGAGGGGAATGGAGGGCTTATGAGAAGAACTGTGGGAAGCTTTGGTTCTGTATCTGTGGCTCTGATTTCAAAGACAAGAGGTCCTTTAAAGACCATGTTCGTGCCTTCGGTGATGGACATGCTCCTCACACTGTTGAGAGTTTTGATCAAAAGCAAATATTAGGGGGTGAAGAGGATGATGAATTAGAAGGAGTAGAAGATGAAGATGATCACAATAACAACAACAATCACAGTGGAACTATGTTTGGTTTTAATTAA 534 0.3989 METNTEMKAKVLALNARRILKTKVLALDKTATFGPKFKILGFHFIVYLHLLALSLACRQQTKEIGGLIRITVGSFGFVSVALISSIRDPSKTRGEWRAYEKNCGKLWFCICGSDFKDKRSFKDHVRAFGDGHAPHTVESFDQKQILGGEEDDELEGVEDEDDHNNNNNHSGTMFGFN. 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02406 177 PANTHER ZINC FINGER PROTEIN WIP2 93 161 IPR043584 GO:0003700|GO:0010468
Seca4g02406 177 MobiDBLite consensus disorder prediction 152 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02406 Seca-Chr4 41034881 41037655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02406 93 138 C2H2 Transcription Factor Family AT1G13290 82.609 2.39e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02406 - - adu:107490921 110.153