Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02405 GATTGGAGGGCTTATGAGAAGAATTGTGGGAAGCTTTGGTTCTGCATCTGTGGCTCAGATTTCAAACATAAAAGGTCCCTTAAAGACCATGTTTGTGCCTTTGGTGATGGACATGCTCCTCACACTGTTGAGAGTTGTGATCAACAAGAAATATTAGGGGATGAAGAGGATGGTGAATTAGAAGCTCTCAACAGTGTGTGGATCATGTCCATCACAAAAGGCACGAACATGGTCTTTAAGGGACCTTTTGTGTTTGAAATCAGAGCCACAGATACAGAACCAAAGCTTCCCACCTACAGTTCTTCACATGAGTCCTCCAATCCCCTCTCACAGCAAAGGGTTTTATTTTACAATGAATACTTTCATAAACCCTTTGTTGTGAGAGGGGATTGGAGGGCTTATGAGAAGAATTGTGGGAAGCTTTGGTTCCACATTTGCGGCTCAGATTTCAAACATAAGAGGTCCCTTAAAGACCATGTTTGTGCCTTTGGTGATGGACATGCTCCTCACACTGTTGAGAGTTGTGATCAACAAGAAATATTAGGGGATGAAGAGGATGGTGAATTAGAAGGTGTAAAAGATGAAGATGATCACAACAGCAACAACAATCACAGTGGAAGGATGTTCAGTTTTAATTAA 639 0.4178 DWRAYEKNCGKLWFCICGSDFKHKRSLKDHVCAFGDGHAPHTVESCDQQEILGDEEDGELEALNSVWIMSITKGTNMVFKGPFVFEIRATDTEPKLPTYSSSHESSNPLSQQRVLFYNEYFHKPFVVRGDWRAYEKNCGKLWFHICGSDFKHKRSLKDHVCAFGDGHAPHTVESCDQQEILGDEEDGELEGVKDEDDHNSNNNHSGRMFSFN. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02405 212 MobiDBLite consensus disorder prediction 184 212 - -
Seca4g02405 212 PANTHER ZINC FINGER PROTEIN WIP2 122 194 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02405 Seca-Chr4 41030410 41032117 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02405 1 44 C2H2 Transcription Factor Family AT1G13290 86.364 1.51e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02405 - - adu:107490921 114.39