Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02403 ATGGAGACAAAAACTGAAATGAAAGGAAAGGTTCTTGCATTGAATGCCAGAAGAATACTAAAATCAAAGGTTCTTGCATTAGATAAGACTGCCACTTCTGGCATTAAATGTAAGATCCTTGGCTTTCATTTCACTGTTTATCTGCATCTTCTCGCACTCTCTCTTGCTCGTAGACAACAGACAAAGAGCCACAGATACAAAACCAAAGCTTCCCGCCCACAGTTATTCTCTGAATGCTTGCATAAACCCTTTGTTGTGAGAGGAGATTGGAGGGCTTATGAGAATAACTGTTGGAACCTTTGGTTCTCTATCTGTGGCTCTAATTTCAAACATAAGAGGTCCTTCAAAGACCATGTTCGTGCCTTTGGTGATGGACATGCTCCTCACACTGTTGAGAGTTGTGCTCAACAGGAAATATTAGGGGGTGAAGAGGATACTGAATTAAGAGGAGTAGAAGATGAAGATGATCACAACAGCAACAACAATAACAGTGGAAAGATGTTTGGTTTCAATTAA 516 0.4031 METKTEMKGKVLALNARRILKSKVLALDKTATSGIKCKILGFHFTVYLHLLALSLARRQQTKSHRYKTKASRPQLFSECLHKPFVVRGDWRAYENNCWNLWFSICGSNFKHKRSFKDHVRAFGDGHAPHTVESCAQQEILGGEEDTELRGVEDEDDHNSNNNNSGKMFGFN. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02403 171 PANTHER ZINC FINGER PROTEIN WIP2 66 155 IPR043584 GO:0003700|GO:0010468
Seca4g02403 171 MobiDBLite consensus disorder prediction 150 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02403 Seca-Chr4 40959932 40961254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02403 49 131 C2H2 Transcription Factor Family AT1G13290 50.602 1.45e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02403 - - aprc:113870355 120.553