Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02385 ATGGAGGAACTGATAAAAATGGTTGTCTCTGGTGAGCCTTTATGGGTGGTGAGCAACCTTGGTTTTGGGATTCTCAATGAAGCTGAATACTCAAGGACTTTCCCTGGGGGAATGAGTCCAAAACCTTTGGGGTTCAAAACGGAAGCTTCAAGGGATTCCGTCGTGGTTATCATGAATCATATGAACCTCGTTGAGATCCTTATGAATGTGGTCAGTTTTATAATGAATTTTAGAATCATTGGTCAAGTATGTTTTGCGGTAGACGTCCTGTCAACTGGAGTGGGAGGAAACTACGACGGAGCCTTGCAACTGATTTCAGCTGAGTTTCAGGTTCCATCGCCGCTTGTTCAGACTCGTGACAACTATTTCATAAGGTACTGTAAGCAACACCTTGGTGGTGCGTGGCGGTGGTTGATGTTTCCATGGAAAATTTGCAACCTGGTAGTGCAATCCCTATATACCGAAGAAGACCCTCTGGTTGTATAA 486 0.4444 MEELIKMVVSGEPLWVVSNLGFGILNEAEYSRTFPGGMSPKPLGFKTEASRDSVVVIMNHMNLVEILMNVVSFIMNFRIIGQVCFAVDVLSTGVGGNYDGALQLISAEFQVPSPLVQTRDNYFIRYCKQHLGGAWRWLMFPWKICNLVVQSLYTEEDPLVV. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02385 161 Pfam START domain 1 135 IPR002913 GO:0008289
Seca4g02385 161 ProSiteProfiles START domain profile. 1 161 IPR002913 GO:0008289
Seca4g02385 161 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 135 IPR042160 -
Seca4g02385 161 SUPERFAMILY Bet v1-like 2 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02385 Seca-Chr4 40526304 40526951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02385 1 135 Homeobox Transcription Factor Family AT4G04890 60.741 6.88e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02385 K09338 - jre:108990742 176.792