Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02368 ATGCGTCAATTTGTTTGTAATAGAGAGGGGTTGAGGAATAAAAAACATTTGGAGAGGGTGGATCGAAAAAGAGAGTCTAAGGCTTTAACGCGAAGTAATTGTCTTGCTAAGCTTCGTGTTCATTTAGACTTGAGGTCTGGGAAGTGGGTAGTGATTAGCTTTGAGGAAAGTCATAATCATGTCTTAACCCCTCCTCAGTGGGTCAGAAAAATTTATGATATGAAGACATTATGGGCAACTGCTTACTTGAGAGAGAATTTTTTCTGTGGCATTAGGACTACTTCCATTTGTGAAGGTATTAAATCCTTTATAAAGAGGTATGTTCAAAAAAAGAACAGTCTTGTGGATTTTTTGCATAATTTCGAAAGAGCTGTTAGAGACTATAGGCACAATGAACAATTGTCGGATTTCAAATCATTGTTTTCTGATCCGGTATTGTCAACGGGGCTGTATAGGATTGAATTATGTGCTTCAAAGGTATATTCAAGAAACAAATTCAAAGATGTTAGGAAAGAGATTGAAGGTGCTGCTTCATTAAATGTGGTTGACCGTGTAGAGGATGGAAATAATGTTCGACTGAAAATGAATAGATTTTGTAGTCCAAGCAGTCAATATGTAGTCATGTTTGACAAAAGTGCACGTAAATTTTTAATATCATGTTCTCACATATTTTGTTCAATGAAGCACAAGCATATTGGTGAAATTCTTGAAAGTATGATATATAAGAGATGGACAAAATCAGCCAAAGATGAATTCCTTTCTTCACTGTCTGCTGAAGATGGAGATTCTGGTAAATTAAAGATGTTGAGAATTGTTGTAATGTCTGTTTCATGCAACAGGTTAATGGAAGCTTCTTGTTGTAATCAAGAGGATTATGTTGAGATCATGGAAGACCTTCAAAAGCTAACTGAGAAAGTGGAGAATCGTAAAAATTCAGAGCGTAGTCAGCCTAAAACAAGAAATGTGGTTGGTGATCCAACAATGGTTAAGACCAAAGGTGCCCCTAAGAAGAAGTTTACAAAGAAGAGAAGGTGTCCACACTGTTGTAAGGTTGGGTACACAATTCACACATGCCCTACACTGCTTGCACGTGGTGGCTTATGTGAAGTTAATGAAGTTTCTGTTTATGGATCTGAAGAGGAAGAAGACACTATAAATGTAATTTATTATTTGAATTTATGCATTTTCTTTTAA 1194 0.3601 MRQFVCNREGLRNKKHLERVDRKRESKALTRSNCLAKLRVHLDLRSGKWVVISFEESHNHVLTPPQWVRKIYDMKTLWATAYLRENFFCGIRTTSICEGIKSFIKRYVQKKNSLVDFLHNFERAVRDYRHNEQLSDFKSLFSDPVLSTGLYRIELCASKVYSRNKFKDVRKEIEGAASLNVVDRVEDGNNVRLKMNRFCSPSSQYVVMFDKSARKFLISCSHIFCSMKHKHIGEILESMIYKRWTKSAKDEFLSSLSAEDGDSGKLKMLRIVVMSVSCNRLMEASCCNQEDYVEIMEDLQKLTEKVENRKNSERSQPKTRNVVGDPTMVKTKGAPKKKFTKKRRCPHCCKVGYTIHTCPTLLARGGLCEVNEVSVYGSEEEEDTINVIYYLNLCIFF. 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02368 397 MobiDBLite consensus disorder prediction 306 337 - -
Seca4g02368 397 Coils Coil 292 316 - -
Seca4g02368 397 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 60 IPR031052 GO:0006355
Seca4g02368 397 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02368 Seca-Chr4 40240206 40242199 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g02368 FAR1 5.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02368 - - tpra:123910662 299.671