Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02334 ATGGAGGTTGTGGATACCAGAAAGCTACAGCAGCAGCATTTTCATGTGTTGGCAGTAGACGACAGCGTTATCGATAGGAAGCTTCTCGAGAGGCTCCTTAGAGCTTCTTCATGCAAAGTTACCTGCGTGGATTCTGGAGATAAGGCTTTGAAATATCTTGGTCTCCTTGATGATACTTCTTCCTCAACAAAATCTTTAGAATCTTCATCTTCTCCTCAACCATTACAGCAAGAGGGAAGTAAAGTGAATTTGATCATGACAGACTATTGCATGCCAGGGATGAGTGGCTATGATTTACTTAAAAGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTTGTGATTATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGTGCAGAGAAGTTTCTATTGAAGCCTCTACAATTATCGGATTTGGAGAAGCTTCAGCCTTACTTTTCCAAGTCCCTTGATAATTCTTGTGATGAAGAACATGCTAACAGTTCCATAGATTCAGACAATGACAATCTCATCAACAATAATAACAGTAATAATAGCAGTAATAGTAATAGCAAAAGGAAAGCCATGTCTCCTGAGCCTCCAGAGAGATCAAAACCCAAACTGAAAGGGTTGGCAGTGGTATAA 645 0.4047 MEVVDTRKLQQQHFHVLAVDDSVIDRKLLERLLRASSCKVTCVDSGDKALKYLGLLDDTSSSTKSLESSSSPQPLQQEGSKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEGGAEKFLLKPLQLSDLEKLQPYFSKSLDNSCDEEHANSSIDSDNDNLINNNNSNNSSNSNSKRKAMSPEPPERSKPKLKGLAVV. 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02334 214 Pfam Response regulator receiver domain 16 148 IPR001789 GO:0000160
Seca4g02334 214 CDD REC_typeA_ARR 16 149 - -
Seca4g02334 214 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 194 IPR045279 GO:0009736
Seca4g02334 214 MobiDBLite consensus disorder prediction 171 195 - -
Seca4g02334 214 SMART REC_2 14 150 IPR001789 GO:0000160
Seca4g02334 214 Gene3D - 15 184 - -
Seca4g02334 214 MobiDBLite consensus disorder prediction 160 214 - -
Seca4g02334 214 ProSiteProfiles Response regulatory domain profile. 15 154 IPR001789 GO:0000160
Seca4g02334 214 SUPERFAMILY CheY-like 14 148 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02334 Seca-Chr4 39768567 39772069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02334 11 169 Response Regulator Gene Family AT3G57040 59.006 7.28e-60 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca4g02334 Response_reg 4.2e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02334 K14492 - gmx:100786187 283.493