Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02330 ATGGCAGAGCGTGTGTTACTCACTCCCTCTTCACTGCCTTTACCTTCTCCAATCAAAATGGCTGCTATCGGTGGAGGCGCCGCCGCTCGCATGATCCCCTCCGCTACCAAAGCCACCGTCTCACTCTCTTCCTCTTCCCGTTCCTTCTTCTCATTCTCATCATCCTCTTCTGCTTCCTCGTTCGAATGCTTGCGGTCCTCTCCTCGCATTTCTCACTTGTTTCTCAATCAGCGAAGAGCAGAGATTCGTGTTTCGAGTGGAGGATACGGAACAGTGTCTGCGCCAAAGGCCTTTGCGTCTGATCCTGATCAGTTGAAGAACGCTAGAGAAGATATCAAGGACCTTCTCAGGACCAAGTTTTGTCATCCTATTCTGATACGTTTGGGATGGCATGATGCTGGTACTTACAATAAGAATATTGAGGAGTGGCCACAGAGAGGTGGAGCTAATGGTAGCTTAAGATTTGAAATTGAGCTGAAACATGCAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTTCAGCCAATCAAAGACAAATACTCTGGTGTGACATATGCAGACTTATTCCAGTTGGCTAGCGCTACAGCTGTGGAGGAAGCTGGAGGCCCAAAACTTCCCATGAAATATGGAAGAGTGGATGTCACTGGACCTGAACAATGCCCTGAGGAAGGGAGACTTCCTGATGCTGGCCCCAGTTCACCTGCTGATCATTTGCGTCAAGTTTTTTACCGAATGGGTTTGAATGACAAGGAAATTGTTGCATTATCTGGTGCACACACACTGGGGCGGTCTAGGCCGGATCGTAGTGGTTGGGGAAAGCCTGAGACTAAATATACGAAAGATGGGCCAGGAGCGCCTGGAGGACAATCCTGGACAGCGCAGTGGTTAAAGTTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAGGACCTATTGGTACTGCCAACTGATGCTGCTCTTTTTGAAGATCCATCCTTCAAGGTATATGCCGAGAAATATGCTGAAGACCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTTAGCAACCTTGGTGCCAAATTTGATCCTCCAGAGGGCATTGTGATAGATGGTTCTCCAAATGCTGGGGCAGAGAAGTTTGTAGCAGCCAAGTACTCCAGTGGAAAGGTTCTAAGCTTGCATGATTAA 1191 0.4719 MAERVLLTPSSLPLPSPIKMAAIGGGAAARMIPSATKATVSLSSSSRSFFSFSSSSSASSFECLRSSPRISHLFLNQRRAEIRVSSGGYGTVSAPKAFASDPDQLKNAREDIKDLLRTKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEIELKHAANAGLVNALKLLQPIKDKYSGVTYADLFQLASATAVEEAGGPKLPMKYGRVDVTGPEQCPEEGRLPDAGPSSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGSPNAGAEKFVAAKYSSGKVLSLHD. 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02330 396 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 108 234 - -
Seca4g02330 396 CDD ascorbate_peroxidase 93 363 - -
Seca4g02330 396 ProSiteProfiles Plant heme peroxidase family profile. 184 387 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 FunFam L-ascorbate peroxidase T, chloroplastic 230 353 - -
Seca4g02330 396 ProSitePatterns Peroxidases proximal heme-ligand signature. 252 262 IPR019793 -
Seca4g02330 396 SUPERFAMILY Heme-dependent peroxidases 99 361 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 91 362 IPR044831 GO:0004601|GO:0034599
Seca4g02330 396 PRINTS Haem peroxidase superfamily signature 184 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 PRINTS Haem peroxidase superfamily signature 202 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 PRINTS Haem peroxidase superfamily signature 292 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 PRINTS Haem peroxidase superfamily signature 122 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 Gene3D - 108 361 - -
Seca4g02330 396 PRINTS Plant ascorbate peroxidase signature 202 214 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 PRINTS Plant ascorbate peroxidase signature 101 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 PRINTS Plant ascorbate peroxidase signature 183 201 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 PRINTS Plant ascorbate peroxidase signature 321 345 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 PRINTS Plant ascorbate peroxidase signature 122 137 IPR002207 GO:0004601|GO:0006979|GO:0020037
Seca4g02330 396 Gene3D Peroxidase, domain 2 230 353 - -
Seca4g02330 396 MobiDBLite consensus disorder prediction 259 290 - -
Seca4g02330 396 Pfam Peroxidase 109 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02330 Seca-Chr4 39669017 39675224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02330 108 358 Peroxidase AT5G66390 29.010 5.92e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02330 K00434 - gmx:100802238 654.44