Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02281 ATGGGTGCGTGGCTGAGAAATGCAAAGCCATATCTTCTATTGTTGGCCGTCCAATTTGGCTCTGCTGGCATGTTCATTTTCGCCATGGATGCTATCAAGAAAGGCATGAGCCATTACGTGTTCATCGTCTATCGTAATGCCATAGCCTCTATAACTCTCTCTCCCTTCGCATTTGTTCTAGAAAGGAAAGTTAGGCCCAAGATGACTGTCCGGGTATTTTCAGAGATTATGGCACTCGCTTTCTTCGAAATAATACTTGATCAATGTTTCGCCCTCTTGGGGATGAAATTAACGTCAGCGTCGTTTTTATCTGCTGTGATGAACTCCGCACCCTCCATTACTTTTGTGTTGGCAGTTATTCTAAAATTGGAGCACATGAAGATTAAGGAGGTGGCATGTCAAGCCAAAATGATTGGCACTGCAGTAACTTTCGGAGGAACCTTGCTAATGGCACTGTACAAAGGTCCAATTGTTAGTTTTGTGCGATCATCATCAAGTCACCATGCTGCACAGGCTGATCAGAATGTGACCGGCAACCACTGGGTCATAGGGACATGCTTCCTCCTCATTGGTTGTGCAGGATTTTCTATGTTTTACATATTGCAGGCCATAACATTGAGAAAGTACCCAGCAGAAATGTCCCTGGCTACATGGGTTTGCTTTATAGGTGCACTTCAAAGCTCTGTTGTAGCATTTTTTGCAGAGCGCCACCATCCTCATGCTTGGTCTCTCGGTTGGGATACAAGACTCTTTGCCCCTGCTTACGCGGGGATAGTTACTTCAGGGGTTCAGTATTACATACAAGGCATGGTCATAAAAACCATGGGTCCAGTTATTGTAACTGCTTTTAATCCCCTCCGTATGATCATAGTCACTGCCATGGCTTGCATTATTCTCTCTGAGCAACTCTACCTTGGAAGGTACTACATTCACCACACTTCTTATCTTTCCAAGTGTGTATGTTGTCCGGTTTACCCAATTTCCCAAAATCACGTTTTAAACGTGGATTCTGACGAACACTACATAGAGTAA 1032 0.4419 MGAWLRNAKPYLLLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASITLSPFAFVLERKVRPKMTVRVFSEIMALAFFEIILDQCFALLGMKLTSASFLSAVMNSAPSITFVLAVILKLEHMKIKEVACQAKMIGTAVTFGGTLLMALYKGPIVSFVRSSSSHHAAQADQNVTGNHWVIGTCFLLIGCAGFSMFYILQAITLRKYPAEMSLATWVCFIGALQSSVVAFFAERHHPHAWSLGWDTRLFAPAYAGIVTSGVQYYIQGMVIKTMGPVIVTAFNPLRMIIVTAMACIILSEQLYLGRYYIHHTSYLSKCVCCPVYPISQNHVLNVDSDEHYIE. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02281 343 PANTHER WAT1-RELATED PROTEIN 10 308 IPR030184 GO:0016020|GO:0022857
Seca4g02281 343 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020
Seca4g02281 343 Pfam EamA-like transporter family 183 305 IPR000620 GO:0016020
Seca4g02281 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02281 Seca-Chr4 38919377 38921571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02281 1 340 Nodulin-like Gene Family AT1G21890 43.714 4.91e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02281 - - gmx:100820569 538.11