Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02278 ATGACCATGATGAGTACTGAAAATTTGATTCAGAGATTAGGCCTGCTATTTACTAGTTCAAAACCATACCTGTTAATGATTGGTTTGCAATTTGGCATGGCCGGAAATTACATCTTTGGAAAGGATATTCTTAACCGTGGGATGAGTCGTTTTGTGTTTATTGTCTATCGTAATGCCATGGCTACCATTGCCCTTGCTCCTTTCGCATTCATTCTTGAAAGGAAAAGTAGACCCAAGATGACGCTCCCTGTCTTTCTACAGATAATGGTCCTTGGATTTCTAGAGCCAGTTTTTAACCAAAGCTTCACTTACTTGGGGATGAAGTACACTTCTGCTTCATTCACATCTGCCATCATGAATGCTGTGCCCTCTATCACCTTTCTCCTTGCAGTCATCCTCCGGTTGGAGCGTCTTAAATTGAAGGAGATCAGGAGTGAAGGCAAAGTGATTGGAACATTAGTGACCTTTGGAGGTGCTTTGCTAATGGCAATTTACAAAGGTCCTGGATTCAACCTTTTTCATTCAGGAAACACAAGCCACCATGAAGATGGAAGCCACTCATCATCCTCTCATACCAACCACCAAACCACTGGAGCTCTTTACATACTAATGGGTTGTGTGGCTTTGTCATCTTTCTACATTTTACAGTGTGTGAGGTTTCGTGTCTCATGTGGATTTGCTATATTAATTGTTGTGGGAACGGCAGTCAGTAACGGTGAAAAGATACCCAGCGGAGCTATCATTGGCAAGTTTGATATGCTTAGCAGGAGCAGCTGA 777 0.4247 MTMMSTENLIQRLGLLFTSSKPYLLMIGLQFGMAGNYIFGKDILNRGMSRFVFIVYRNAMATIALAPFAFILERKSRPKMTLPVFLQIMVLGFLEPVFNQSFTYLGMKYTSASFTSAIMNAVPSITFLLAVILRLERLKLKEIRSEGKVIGTLVTFGGALLMAIYKGPGFNLFHSGNTSHHEDGSHSSSSHTNHQTTGALYILMGCVALSSFYILQCVRFRVSCGFAILIVVGTAVSNGEKIPSGAIIGKFDMLSRSS. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02278 258 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Seca4g02278 258 PANTHER WAT1-RELATED PROTEIN 21 217 IPR030184 GO:0016020|GO:0022857
Seca4g02278 258 Pfam EamA-like transporter family 21 162 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02278 Seca-Chr4 38831136 38835067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02278 21 249 Nodulin-like Gene Family AT4G08290 50.000 1.27e-76 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02278 - - gmx:100786326 328.561