Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02247 ATGAGCAAACCCAAAACCCACAGAAAACCAACCATTACCAAGCATGTCAGCCAAAACCAAAACCAGCAGCCACAGAAAACAGATAAACAACCTTCATGGTCAGTGGTAAGAGGACTATTGGCTTGTAGAAATGTCCAAGTTCAACAACAACAACAAACGCAGAAGGAAGCAAAACCAAAACCTCAACCGCAACCGGTGCCAGAAGCAAAACAACCAAGGAAAAAACAGGAACAGAGAAAGCTGCAAGAGGAACGAGTCCCAGAAGAAAACAGCAAGAAATGCAAGAAGATGAAATGTTCAGGTTCGCTCTGTAACAACACAGGGGTGATGGCAAAGCCTGAAACAGGAACCCAAGATATTCACAAGAAGAAGGTGTCAATGGGTGGATGCAAAAACAATGATGCTTCTAGCAGATCCATGAAAGCTCCTCTGAATGAACTCAATGGAGTCGTGTCAGCCTCTTCTTCTTCTTCATTGTCAGCATCTTCTAATTCTTCTGCTGGTGGGTCTTTCAGGACAATGCCATTCAGGAGATTCTCTGGTTGTTATGAGTGCCGAATGGTGGTAGACCCTGTTCTTGGTTTCACCAGAGACCCTTCTCTAAGGAGTACCATTTGTTCTTGTCCTGACTGTGGTGAGATCATGAAAGCTGAAAACTTGGAGCATCATCAAGCTGTCAAACATGCAGTTTCTGAACTGGGTCCAGAAGATACAAGCAAGAACATAGTTGAAATTATATTCCACTCTAGCTGGCTAAAGAAACAATCACCAGTGTGCAAAATTGACCGCATCCTTAAAGTCCACAATACCCAGAAGACAATAAGCAAATTCGAAGAGTACAGAGACTCAATCAAATCCAAAGCCACGAAGCTCTCCAAGAAACACCCACGTTGCATAGCAGATGGCAATGAGCTACTAAGGTTTTACTGCACCACCTTCGTGTGTTCACTAGGCCTAAATGGGTCCTCCAATCTCTGCAACTCAACGTCACAATGCAATGTCTGTAGCATAATCAAACACGGATTCAAGTTGAGTGGAGGAAATGGTATATTGACAACGGCAACAAGTGGAAAGGCCCACGACAAAGCGTGTGTTACAGTTTCAGAGGATGAGAGTGAGGACAAGAGGGCAATGCTGGTTTGTCGGGTGATAGCAGGCAGGGTGAAGAAGAACACAGAAGGGGGTATGGAAGAGTATGATTCGGTTGCAGGGGCTGTTGGGGCTTATTCTAATTTGGATGAGTTGTATGTGTTCAACCCGCGAGCAATATTGCCTTGCTTTGTTGTAATCTACAGAGACTTCTGA 1305 0.4444 MSKPKTHRKPTITKHVSQNQNQQPQKTDKQPSWSVVRGLLACRNVQVQQQQQTQKEAKPKPQPQPVPEAKQPRKKQEQRKLQEERVPEENSKKCKKMKCSGSLCNNTGVMAKPETGTQDIHKKKVSMGGCKNNDASSRSMKAPLNELNGVVSASSSSSLSASSNSSAGGSFRTMPFRRFSGCYECRMVVDPVLGFTRDPSLRSTICSCPDCGEIMKAENLEHHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQSPVCKIDRILKVHNTQKTISKFEEYRDSIKSKATKLSKKHPRCIADGNELLRFYCTTFVCSLGLNGSSNLCNSTSQCNVCSIIKHGFKLSGGNGILTTATSGKAHDKACVTVSEDESEDKRAMLVCRVIAGRVKKNTEGGMEEYDSVAGAVGAYSNLDELYVFNPRAILPCFVVIYRDF. 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02247 434 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 96 431 - -
Seca4g02247 434 MobiDBLite consensus disorder prediction 13 32 - -
Seca4g02247 434 MobiDBLite consensus disorder prediction 43 59 - -
Seca4g02247 434 MobiDBLite consensus disorder prediction 115 138 - -
Seca4g02247 434 MobiDBLite consensus disorder prediction 70 92 - -
Seca4g02247 434 Gene3D - 228 433 - -
Seca4g02247 434 MobiDBLite consensus disorder prediction 1 92 - -
Seca4g02247 434 SUPERFAMILY ADP-ribosylation 230 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02247 Seca-Chr4 38302549 38304848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02247 29 432 C2H2 Transcription Factor Family AT1G75710 40.000 3.53e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02247 - - gmx:100817333 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02247 4 38302549 38304848 Seca4g02247 4 38302549 38304848 ECH