Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02237 ATGAATGTGTCATCGATTCCAATAGTCGAAGATGTAGAGAAATGGGTCAATAATATTCATGGAAATATTGTGCAACATGGCCAAGGGAGTGTTGTTGAATATTCATCACAATTGGAAATGGAGTTTGAATCCGAGGTAGAGGCCTATGAATTTTATAATGAGCACAGTAGAAGAAATGAGTTTGGTATTCGTAGAGAATATGGAAATAAAAGTAAAAAAGATGGAATCTTGACTTCAAGAAGATTCTCATGCTTCAGAGAGGGTAAACGAGGCATTAACAAACGAGACCACTTGATGAAAGAGCCTAGAGCAGAAACCAGAACAGGATGTGAAGCACAGTATGTTCATTTGATTCGCTCTCATCGACACATATTAGAGTCACAAGCATCACAAATTGTATTAGCGGATGAATCTGGATTGAAGCCAAAAGATTTTCATGAATACATGCCCAAGCAAGCTGGTGGAATATACACTGTTGGTTATACAAAACAAGACCATAAGAATTACCTTCGGACTAGAAGGAAACAATCTTTAAGGTATGATCAAGATGCGGCAATGGCTAAGGCTATTTCTTTAGTTATGCCAGAAACATTTCATGGATTATGCACTTGGCATATAAGAGAAAATGCCCTAAGGCATATGAACCATCTATATCAAAAAAGTTCACGATTCTGCTCAGATTTTGAAGCATGTATTGATCAACATGAGGAGGAAGATTTAAATTTGGTGCAATTTTTCACACACTTTGAGAGGGTTGTTAATGGAAAACGGAACAATGAGTCAGAAGCTGATTATGAGTCAAGGCACAAGTTGCCTAGATTGAAAATGAAGAAAGCCCATATGCTTGTACAAGCTGGAAACATTTACACTCCAAAAATTTTTGAGGAATTCCAAACGGAATATGAGGAATATCAAGGCACTTGCATCAAGGAATTAAGAAAAGGGTTATATATTGTTCCAAATTATGATAATAGTAAGGAACGAACAGTTACGGGGAATGTTGTGGATCAAAAGGTTGTTTGTGATTATTGTAAATTTGAGACTCATGGTAACTTATGCAGTCATGATTTGAAAGTTTTGGATGTGATGAATATCAAACTAATTCCTCAACACTATATACTCAAGCGATGGATAAGAGATGCAAGGTTTGGAGCTAAAAAGTCTATGGATGGAGGAGAATCAATGGCAATGTGTGATGTATCCATATCATTAGCAAATGGAAGTATTGACAACAATGTGAACACCATTGATTTTGGTGGGGCAAAAGGCATAAAGAAGCGAGATTGCTCATATAAGAGTAAAAAACAGCCTAAATCTTGGGTTGAGAAATTGGCTAGAAAGAAAAAGCAACTTCAATCTGTACAAACAAGAGCCACTGCACATTGCAAAGAATCCAAACAGTCCCAGCCATTGCAAGACGATCCAAACAGTCCTAGCAGCACATTGCAAATAGTTTTAGGATTTGCAAATAGTCCTAGCACACTTCTGCTCAAAGGGCTTAGTTGCATAGAAGGCATAACTCCTGCAAGTCAAAAGAAAAAGGGCATCCCTGGCCCCAAAACAACTCCTACTGGCTTCCATGGCCATTCTGAGATCCCCGCACATCTGAAAGTAAATTCCCACAGAGTGGGACATGGCTGTAATGTGTTTTTACCTAACACCCGGGGTCTTTTCGCTATCTGTGACTGTGATTGA 1695 0.3829 MNVSSIPIVEDVEKWVNNIHGNIVQHGQGSVVEYSSQLEMEFESEVEAYEFYNEHSRRNEFGIRREYGNKSKKDGILTSRRFSCFREGKRGINKRDHLMKEPRAETRTGCEAQYVHLIRSHRHILESQASQIVLADESGLKPKDFHEYMPKQAGGIYTVGYTKQDHKNYLRTRRKQSLRYDQDAAMAKAISLVMPETFHGLCTWHIRENALRHMNHLYQKSSRFCSDFEACIDQHEEEDLNLVQFFTHFERVVNGKRNNESEADYESRHKLPRLKMKKAHMLVQAGNIYTPKIFEEFQTEYEEYQGTCIKELRKGLYIVPNYDNSKERTVTGNVVDQKVVCDYCKFETHGNLCSHDLKVLDVMNIKLIPQHYILKRWIRDARFGAKKSMDGGESMAMCDVSISLANGSIDNNVNTIDFGGAKGIKKRDCSYKSKKQPKSWVEKLARKKKQLQSVQTRATAHCKESKQSQPLQDDPNSPSSTLQIVLGFANSPSTLLLKGLSCIEGITPASQKKKGIPGPKTTPTGFHGHSEIPAHLKVNSHRVGHGCNVFLPNTRGLFAICDCD. 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02237 564 MobiDBLite consensus disorder prediction 510 530 - -
Seca4g02237 564 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 425 IPR031052 GO:0006355
Seca4g02237 564 MobiDBLite consensus disorder prediction 452 479 - -
Seca4g02237 564 Pfam FAR1 DNA-binding domain 50 114 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02237 Seca-Chr4 38085985 38090531 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g02237 FAR1 6.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02237 - - tpra:123895462 268.855