Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02226 ATGGCAGCGGTGGCTTTCGTGGAGAAGCGTTTGTACAGTACTAACCTCAAACACGACGTCGTTCGGAGCTTCGAGTCAAGCCAGGATGTGATGTGTGGGATGAAGAAGACACTGGAACCGCTGTTGATATCCGATTCCTCAAGCGATGGGGAAGATGCAAATAATCTGAAGAAGGAGCTTATTAGAAAGGGAAACACCGAAGTAGAAGCCTCCATCTTCGACCCTCGCGACGAGGGAACCTTGGACCACTGGATCCAACGGAGCCCCTCTCTTATCCGCCTCACAGGAAAGCACCCTTTCAACTCAGAGCCACCACTCTCACGCCTCATGCACCATGGCTTCATCACCCCTGTCCCAATCCACTATGTCCGTAACCATGGGCCCGTTCCCAAGGCCCGTTGGGAAGACTGGGCCGTTGAGGTCTTCGGCCTTGTTAAGCGCCCGGCCCAGTTCACCATGGATCAGCTGGTGCACGACTTCCCCAGCCGAGAGTTCCCTGTCACACTCGTCTGCTCCGCTAACCGTCGCAAGGAGCTCAACATGGTGAAACAGAGCATCGGCTTCAACTGGGGACCTGCTGCCACTTCCACTTCTGTGTGGCGTGGTGTACCGTTAAGGAGCGTGCTCAAGCGATGTGGGATTTATAGCCGCAATAGTGGGGCCCTCTATGTTTGCTTCGAAGGCGCGGATGAGCTGCCAGGTGGCGGTGGGTCCAACTACGGGACAAGTATCCTGAGGGAGGTTGCACTGGATCCCTCCCGCGACATCATCCTTGCCTACATGCAAAACGGTGAGCTTTTGACTCCGGATCATGGGTTTCCATTACGGGTCATAATACCCGGTTTCACTGGTGGCCGCATGGTGAAATGGTTGAAGCGCATAGTTGTCACTACCCATGAATCTGACAGCTATTACCATTACCATGACAACAGAACACTTCCCTCCCACGTTGATGCTGAGCTTGCTAATGCAGAAGGGGGTGGGAGAAAGGTGACACGTGTTGAGGTGACAATGGATGATGGTGAAATATGGCAAGTATGCAAGTTGGACCATCTAGAGAAACCAAACAAATATGGTAAGTATTGGTGTTGGTGCTTCTGGTCCTTGGAAGTTGAGGTGTTTGATATACTTCGAGCCAAAGAAATTGCGGTGCGTGCTTGGGACGAGGCCCTTAACACCCAACCTGAGAAGCTCATTTGGAATCTCATGGCAAACCTTACTATATATAAGAAAACACATCTAACCAATCTTTTGGTATCTAATATATTTTCACTTTACAATACACAGGGCATGATGAACAACTGCTGGTTCAAAGTCAAAACTAACGTGTGCAGGCCCCACAAGGGAGAGATGGGCATAGTGTTCGAGCACCCGACCCAACCAGGTAACTATTCTGGTGGTTGGATGGCTAAAGAAAGACTCCTAGATAAATCATCAGAATCTAGCCCAACTCTTAAGAAGAGTGTTTCCTCAACATTCATCAACACTACTAGCTCAAAAACATATACCATGTCTGAAGTTGTAAGGCATAACAACGCCGATTCGGCTTGGATCGTCGTCCACGACCATGTCTACGATTGCACTCACTACCTCAAGGACCACCCTGGTGGCATCGACAGCATACTCATCAATGCCGGAACTGATTGTACTGAGGAGTTTGAAGCCATCCACTCTGATAAAGCTAAGAAAATGATTGAGGTTTATCAAATTGGCAAGCTCGTGACCACTAACTACCCTTCTGACTCGTTGCTTGATAACTCTATGTATGACAATTCTAACAACATCCATTTGGCCCCAGTCAAGGAAGTTACACCACTGTGTAGTGTGGCTCTAATAAAACCAGGCGAAAAGATCCCATGCAAGCTCCTATCAAAAACGTCCATCTCCCACGACGTTAGGATCTTTCGTTTTGCATTGCCTTCCAAGGATCAAATATTGGGTTTGCCAATAGGGAAACACATATTCTTATGTGCCACCATTAACGAGAAGCTATGCATGCGAGCTTACACTCCAACAAGCACCGATGATGAAGCGGGGTACTTCGATCTCGTGGTCAAGATTTACTTCAAAGGGGTGCACCAAAAGTTCCCTAATGGTGGCCTTATGTCTCAACACTTAGACTCTCTACCTATTGGATCAATCTTGAATGTGAAAGGTCCATTGGGCCACATAGAATACATTGGAAAAGGAAACTTTCTTATTCATGGAAAACACAAGTTTGCCAAGAGGCTGGCCTTGTTGGCTGGTGGTACTGGGATCACACCTATTTACCAAGTGATCCAAGCGATTCTTAAGGATCCAGAAGATCACACCGAAATGCACTTCATATATGCAAATCGAACTGAGGATGATATACTGTTGAGGGAAGAGCTCGATTCATGGGCTAAAAAGCATGAACAACTCAAGGTGTGGTATGTGGTACGGGAAAGCGTAAAAGAAATGTGGCAATATAGTGTAGGTTTCATCACAGAAAGTATCCTAAGGGAACATATTCCTAAAGCATCCCAAGATACGTTGGCTTTTGCCTGTGGACCATCACCTATGATTCAGTTTGCAGTGCAACCAAAATTGGAGAGGTTAGGTTATGATATCAAGAACAACTTGTTTGTGTTTTAA 2616 0.4725 MAAVAFVEKRLYSTNLKHDVVRSFESSQDVMCGMKKTLEPLLISDSSSDGEDANNLKKELIRKGNTEVEASIFDPRDEGTLDHWIQRSPSLIRLTGKHPFNSEPPLSRLMHHGFITPVPIHYVRNHGPVPKARWEDWAVEVFGLVKRPAQFTMDQLVHDFPSREFPVTLVCSANRRKELNMVKQSIGFNWGPAATSTSVWRGVPLRSVLKRCGIYSRNSGALYVCFEGADELPGGGGSNYGTSILREVALDPSRDIILAYMQNGELLTPDHGFPLRVIIPGFTGGRMVKWLKRIVVTTHESDSYYHYHDNRTLPSHVDAELANAEGGGRKVTRVEVTMDDGEIWQVCKLDHLEKPNKYGKYWCWCFWSLEVEVFDILRAKEIAVRAWDEALNTQPEKLIWNLMANLTIYKKTHLTNLLVSNIFSLYNTQGMMNNCWFKVKTNVCRPHKGEMGIVFEHPTQPGNYSGGWMAKERLLDKSSESSPTLKKSVSSTFINTTSSKTYTMSEVVRHNNADSAWIVVHDHVYDCTHYLKDHPGGIDSILINAGTDCTEEFEAIHSDKAKKMIEVYQIGKLVTTNYPSDSLLDNSMYDNSNNIHLAPVKEVTPLCSVALIKPGEKIPCKLLSKTSISHDVRIFRFALPSKDQILGLPIGKHIFLCATINEKLCMRAYTPTSTDDEAGYFDLVVKIYFKGVHQKFPNGGLMSQHLDSLPIGSILNVKGPLGHIEYIGKGNFLIHGKHKFAKRLALLAGGTGITPIYQVIQAILKDPEDHTEMHFIYANRTEDDILLREELDSWAKKHEQLKVWYVVRESVKEMWQYSVGFITESILREHIPKASQDTLAFACGPSPMIQFAVQPKLERLGYDIKNNLFVF. 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02226 871 Pfam Cytochrome b5-like Heme/Steroid binding domain 503 573 IPR001199 -
Seca4g02226 871 Gene3D - 494 578 IPR036400 -
Seca4g02226 871 Pfam Oxidoreductase molybdopterin binding domain 126 305 IPR000572 -
Seca4g02226 871 SUPERFAMILY E set domains 325 409 IPR014756 -
Seca4g02226 871 CDD cyt_b5_reduct_like 620 871 - -
Seca4g02226 871 PRINTS Cytochrome B5 signature 561 573 IPR001199 -
Seca4g02226 871 PRINTS Cytochrome B5 signature 524 534 IPR001199 -
Seca4g02226 871 PRINTS Cytochrome B5 signature 534 548 IPR001199 -
Seca4g02226 871 PRINTS Cytochrome B5 signature 549 556 IPR001199 -
Seca4g02226 871 PANTHER SULFITE REDUCTASE 325 406 - -
Seca4g02226 871 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 499 574 IPR001199 -
Seca4g02226 871 FunFam Nitrate reductase [NADH] 722 871 - -
Seca4g02226 871 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 715 866 IPR039261 -
Seca4g02226 871 SMART Cyt_b5_2 502 574 IPR001199 -
Seca4g02226 871 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 615 727 IPR017927 GO:0016491
Seca4g02226 871 FunFam NADH-cytochrome b5 reductase 606 721 - -
Seca4g02226 871 FunFam Nitrate reductase 78 327 - -
Seca4g02226 871 FunFam Sulfite oxidase, mitochondrial 497 578 - -
Seca4g02226 871 Gene3D Translation factors 607 721 - -
Seca4g02226 871 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 530 537 IPR018506 GO:0020037
Seca4g02226 871 Gene3D - 325 492 - -
Seca4g02226 871 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 74 320 IPR036374 -
Seca4g02226 871 PRINTS Eukaryotic molybdopterin domain signature 114 130 IPR008335 GO:0016491
Seca4g02226 871 PRINTS Eukaryotic molybdopterin domain signature 268 281 IPR008335 GO:0016491
Seca4g02226 871 PRINTS Eukaryotic molybdopterin domain signature 284 297 IPR008335 GO:0016491
Seca4g02226 871 PRINTS Eukaryotic molybdopterin domain signature 92 106 IPR008335 GO:0016491
Seca4g02226 871 PRINTS Eukaryotic molybdopterin domain signature 193 208 IPR008335 GO:0016491
Seca4g02226 871 PRINTS Eukaryotic molybdopterin domain signature 178 190 IPR008335 GO:0016491
Seca4g02226 871 PRINTS Eukaryotic molybdopterin domain signature 251 267 IPR008335 GO:0016491
Seca4g02226 871 PRINTS Eukaryotic molybdopterin domain signature 167 178 IPR008335 GO:0016491
Seca4g02226 871 PRINTS Eukaryotic molybdopterin domain signature 424 437 IPR008335 GO:0016491
Seca4g02226 871 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 143 178 IPR022407 GO:0043546
Seca4g02226 871 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 783 794 IPR001709 GO:0016491
Seca4g02226 871 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 667 674 IPR001709 GO:0016491
Seca4g02226 871 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 815 831 IPR001709 GO:0016491
Seca4g02226 871 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 745 764 IPR001709 GO:0016491
Seca4g02226 871 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 533 543 IPR001709 GO:0016491
Seca4g02226 871 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 771 780 IPR001709 GO:0016491
Seca4g02226 871 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 839 847 IPR001709 GO:0016491
Seca4g02226 871 Gene3D - 76 324 IPR036374 -
Seca4g02226 871 SUPERFAMILY Riboflavin synthase domain-like 610 728 IPR017938 -
Seca4g02226 871 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 496 577 IPR036400 -
Seca4g02226 871 Gene3D - 722 871 IPR039261 -
Seca4g02226 871 Pfam Oxidoreductase NAD-binding domain 746 853 IPR001433 GO:0016491
Seca4g02226 871 PRINTS Cytochrome B5 reductase signature 745 764 - -
Seca4g02226 871 PRINTS Cytochrome B5 reductase signature 783 794 - -
Seca4g02226 871 PRINTS Cytochrome B5 reductase signature 667 674 - -
Seca4g02226 871 PRINTS Cytochrome B5 reductase signature 839 847 - -
Seca4g02226 871 PRINTS Cytochrome B5 reductase signature 646 657 - -
Seca4g02226 871 PRINTS Cytochrome B5 reductase signature 712 726 - -
Seca4g02226 871 Pfam Mo-co oxidoreductase dimerisation domain 325 407 IPR005066 GO:0016491|GO:0030151
Seca4g02226 871 Pfam Oxidoreductase FAD-binding domain 620 726 IPR008333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02226 Seca-Chr4 37771705 37777315 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02226 621 862 NADPH P450 reductases AT5G17770 39.344 5.01e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02226 K10534 - gmx:732634 1328.15