Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02176 ATGGTGACAATGGGAGTTGCAGCACACACACAGATACAGTTAGAAAAACACGTGATAGAGTGTTTCGGGTCAAAATCCATGGAATTGAAATGGGTAAGGAGAAGAATCAACAAAAGCTCACAGCCACAGGGAATAATAAAACCACTCTTCCCAGTTTACATTTCCACAGACCCACGCCACGTCGATCCTAACCGTCTCCAAGACCTCTACGCCACTTGCAACCACTCTTGCCACAGATTCCCCAACCTCCTTCAGCCCCAACCCCTCGATATTCACAAGCTCCGCATTGCTCTCTCTCACAGTACCCTCCTTGTCTCTGTCTTCTGCAAACCTCACCACCTTGACGCTTTCGCCAATTCCTCTTCTTCGAATTCCATCATGGCTATGGCGGATTTCTTCACTCCCATTACTCCTTCCCGTGATCAATTGGTGGGATTTGGCCGTGCTGTTTCCGATTGTGGTCTCACTGCTTCAATTTATGATGTCATGGTTAATCCATCCCTGCGGAGAATGGGAATTGGTCGAATGATTGTTAAAAAAATAGTGAGAATGCTTACAAATAGAGAGATCTATGACATAGCAGCCCTTTGCTCAGAGAATGAGAGGTTATTTTTTAAGGCGTGTGGATTTGGAGGTGACATTTTGGGTTCTACAACCATGATGTACACAAGAACTGCTTCATCAACAACCGAGGAAGGTGATCAGACCATGACACGTGCAGGCCGAAAGCTATTGTTGGTTCCACCTCTTGTTGAGGGACCCTACAAATCTTCAAGGACGACAACATAA 789 0.4588 MVTMGVAAHTQIQLEKHVIECFGSKSMELKWVRRRINKSSQPQGIIKPLFPVYISTDPRHVDPNRLQDLYATCNHSCHRFPNLLQPQPLDIHKLRIALSHSTLLVSVFCKPHHLDAFANSSSSNSIMAMADFFTPITPSRDQLVGFGRAVSDCGLTASIYDVMVNPSLRRMGIGRMIVKKIVRMLTNREIYDIAALCSENERLFFKACGFGGDILGSTTMMYTRTASSTTEEGDQTMTRAGRKLLLVPPLVEGPYKSSRTTT. 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02176 262 Gene3D - 50 213 - -
Seca4g02176 262 CDD NAT_SF 141 190 - -
Seca4g02176 262 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 96 242 IPR000182 GO:0016747
Seca4g02176 262 Pfam Acetyltransferase (GNAT) family 139 210 IPR000182 GO:0016747
Seca4g02176 262 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 53 221 IPR039143 GO:0004343|GO:0006048
Seca4g02176 262 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 140 210 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02176 Seca-Chr4 36888448 36890850 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca4g02176 Acetyltransf_1 2e-07 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02176 - - aprc:113866648 349.362