Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02141 ATGTCTCCTTTTGTGAGAAGTATTTCCCTGTTGTGGGTGCTTATAATATTGCTTTCAGCCAGCAATATTGCTCTTGGAAAAACACATGTGAAGGTCGTAAATCATTTGACAGGAAATTTGGACTTAACCTTTCACTGCAAATCTGCAGATGATGATCTTGGAGTCAAACTGCTCCATCCTAATGAGTCCTGGGAATGGAGTTTTAAACCTGCCATAATCTTTAGGACCACACGATTCTATTGTCTCTTTCAATGGCAAGATAATGGTGGAATCCAACAACAGAAATGGTTTGATATATACATATCAAATAGGGATGATTGCCAAACCTGTACCTGGTTTATAAGCCAAGATAAACCATGTAGGTACCTTTCTGAAAATGTGAATGAATGCATGGAATGGAATCATTAA 408 0.3775 MSPFVRSISLLWVLIILLSASNIALGKTHVKVVNHLTGNLDLTFHCKSADDDLGVKLLHPNESWEWSFKPAIIFRTTRFYCLFQWQDNGGIQQQKWFDIYISNRDDCQTCTWFISQDKPCRYLSENVNECMEWNH. 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02141 135 Pfam Plant self-incompatibility protein S1 29 133 IPR010264 -
Seca4g02141 135 PANTHER - 26 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02141 Seca-Chr4 36266659 36267066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02141 27 134 Carbohydrate Esterase AT3G16970 38.462 2.00e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02141 - - lja:Lj3g3v2995840.1 112.079