Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02132 ATGGCTTCCCGTTATGATTTAATCTGTAATGTGAGTGGAGGCTCTGAGCATAAGATATGGAGAATTAAAGTCAGAGTCATTAGGCTATGGAGGTCTTCATATTTTAAGGATAACAATAATAAATCAATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAGTAGTATCAATGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTAGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCACTGAAATATTGAATGAAACTAAGGACGACAGACGTTTGGTTGGTAAGTTTTATTTACACTATGTTGAATGA 453 0.3731 MASRYDLICNVSGGSEHKIWRIKVRVIRLWRSSYFKDNNNKSMIELVVLDEQGGRIQCTVKSIHVYLFESSINEGNVYMLENLSVALNSGKYKPTMHEFRMFFKRETRVTLVEDSSIPLYGFSFVPFTEILNETKDDRRLVGKFYLHYVE. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02132 150 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
Seca4g02132 150 CDD RPA1_DBD_A_like 21 109 - -
Seca4g02132 150 Gene3D - 8 115 IPR012340 -
Seca4g02132 150 SUPERFAMILY Nucleic acid-binding proteins 16 115 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02132 Seca-Chr4 36116007 36116546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02132 20 132 Core DNA Replication Machinery Family AT2G06510 29.661 9.87e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02132 - - adu:110274503 171.014