Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02083 ATGGCAATGGTTTCAACAGGCTATCATGCTGTGAAGACTATCTGTGGACGAAGGCAGAGTTGGAGATTGAAAGTGAAGTTGGTGCGAATTTGGAATATGTGCGCTTTAGCAACACCTGAGGATCCATTTGCCACTGAGATGGTTTTAGTAGATGAAGAAGGGGAAACGATAGAGGGCACTATTTTGAAGCAAAACATGAGGAGATTTGCAAATCTGATGGCGGAGGGCCAGGTGTATAAGATAACGAATTTTGGAGTTGTCACAAGCAAAGGAAACTTCAGAGCCTCCCGTCATGACTATAAGATAATGTTCAATGCAAACACAAAGATCACTGCCGTTGCGGCTGCTGTTAATCCACATTTGGGGCTGAAGTTGGTCAAGACCTCTGATATCAAGAACACCATGGGACACTCGGACTACCTCTTGGACTTCATGGGAATTGTATGA 447 0.443 MAMVSTGYHAVKTICGRRQSWRLKVKLVRIWNMCALATPEDPFATEMVLVDEEGETIEGTILKQNMRRFANLMAEGQVYKITNFGVVTSKGNFRASRHDYKIMFNANTKITAVAAAVNPHLGLKLVKTSDIKNTMGHSDYLLDFMGIV. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02083 148 Pfam Domain of unknown function DUF223 46 132 IPR003871 -
Seca4g02083 148 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
Seca4g02083 148 Gene3D - 9 115 IPR012340 -
Seca4g02083 148 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02083 Seca-Chr4 35327952 35328715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02083 9 148 Core DNA Replication Machinery Family AT5G08020 23.288 2.03e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02083 - - mtr:11425976 104.375