Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02045 ATGTGTGCAAAGATGAAAGAATGTGGGAATGGAAAGATGATTATGAAGAAGAATCTTGATCCTGAAGGTTCTTCCATTACCATTAACTTTCTTAAATCACAATGCATTTTGGATTTAAGGAAGAGCCTAAAAAGAAAACGTGAGGAACACGACAACACCAGCAATGTTGTTAATGTTAATGATGTTATTCTTGACCAACCGAGTGATCTGAACTCTAATAATGGGAGGTTCTCCATCCCAATACAACAAATCCAACATGATGCAAGGGATTTCCTTACAGAGAGAGGGGAGCTCTATTTGACAGTACGTGAAGGTGAAGGGAAAATCCAAAAGCTTGTTGGTTTCTTAGTGTCTGTGTTGGATCCAAGTCTTAAACTTTACAACATGTGCTTCAAGAAATGGAAGATGGAGCACACAGAGGTGCACAATATAACTAGTGGATGGAACAACCTTGTGAGAAATAATTCTTTGAAAGCCAATGATACAGTGCAATTGTGGTTTTTCAGAAGCAACAATAATCACATGTGTTTTGCACTCGTCAAGATTTAA 549 0.377 MCAKMKECGNGKMIMKKNLDPEGSSITINFLKSQCILDLRKSLKRKREEHDNTSNVVNVNDVILDQPSDLNSNNGRFSIPIQQIQHDARDFLTERGELYLTVREGEGKIQKLVGFLVSVLDPSLKLYNMCFKKWKMEHTEVHNITSGWNNLVRNNSLKANDTVQLWFFRSNNNHMCFALVKI. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02045 182 Gene3D - 66 182 IPR015300 -
Seca4g02045 182 ProSiteProfiles B3 DNA-binding domain profile. 132 182 IPR003340 GO:0003677
Seca4g02045 182 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 67 182 IPR005508 GO:0003677
Seca4g02045 182 Pfam B3 domain-containing protein At2g31720-like 67 153 IPR005508 GO:0003677
Seca4g02045 182 SUPERFAMILY DNA-binding pseudobarrel domain 67 176 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02045 Seca-Chr4 34781378 34782118 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02045 39 179 B3 DNA Binding Superfamily AT1G05930 24.113 9.93e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02045 - - tpra:123920509 108.997